AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g02216 ATGGCATCCCCTTCTTCTTCTTCCTCCTTCATCTGCAAAACCCACTTTCTAATCGACCTCATCGCTATCTTAATCGTTTCCTGTACTCATAGTTCACAGGTAGAAGCCATTAAAGCACCAATCCGTCCACAAGACATACTCCCACTTTTGCCCCGCCAAGTTTCATGGCCTCTTCTCAACTCTCTTCGAGGTGCCTCCGATCTTCTTCCGAGTTTCGTCGGAGCAGCGTCTATTTCAAATCATTCCGATTTGCAATGGAAGGGGTCTTGCTTTTATCAGAACACTGCGTGGTTAGAGCTCCACAACAAAAGTGGTAGTGAATTTGGTGGAGGCACTCTTCATATCAAGGTAAGCAATGCACACAGTTGGACATGTATGGATATTTATGTCTTTGCTACTCCATATCGTGTGACGTGGGACTATTACTTTTTATCCCGTGAGCATACACTTGAGTTCGACGAGTGGGGAGGGAAAGCTGAGTATGAATATGTAAAACGTAAGGGAGTTGCCATTTTTCTCATGGAAGCAGGGATGTTAGGCACCCTAAAAGCATTATGGGAGGTCTTCCCCCTGTTCACAAATACTGGATGGGGTGAAAGTTCTAATCTTGCTTTTCTCAAGAAACATATGGGAGCTAACTTTGAAGCCCGTCCTGAGCCATGGGTAACAAACATTACCGTAGATGACATCCACTCAGGAGACTTCCTTGCGATATCAAAAATTCGTGGTAGATGGGGCGGGTTTGAGACTCTTGAGAAATGGGTATCTGGGGCGTATGCGGGTCATTCTGCTTGGTGGAACTTTGAGCTGACCGAAGATGATGCTAATCCGCATATTGCATTGCTTCCTTTGCATCCTGACCTTCGATCCAAGTTTAACGAGACTGCTGCGTGGGAGTATGCACAAAGCATGATAGGGTTGCCTTATGGTTATCATAATTTGATATTTAGCTGGATAGACACTATAAGTGATAATTATCCACCACCTTTGGATGCTCATCTGGTTGCTTCTGTTATGACCGTGTGGAATCATCTGCAGCCTGCATATGCTGCTAATATGTGGAATGAAGCCTTAAATAAGCGGCTTGGTACTCAGGGGCTTGATCTTCCTGAAATTTTGGTCGAAGTTGAAAGGCGTGGTTCATCTTTTGCTGAACTATTGGCTATACCTGAACAAGATGAATGGGTATATGCTGATGGAAAATCGACTTCTTGTGTTGCTTATGTCCTTGAAATGTACAAGGAAGCAGGACTCTTTGGAGATCTTGCAAGCCAAATTCAAGTTACTGAGTTCACGGATGCTTACATGCTAAACTTTTTTGAAAACGATTCGAGTAGGCTGCCAAAGTGGTGTAATGAAGGGGACACAGTAGAGCTTCCATTCTGTCAAATCAAAGGGAAGTATCGAATGGAATTACCTGGATACAATAGTATGGATCCGTACCCTCATATGACAGAAAGTTGCCCATCACTTCCCCCAGACTATTCAAGGCCCGATTACTGTTGA 1506 44.16 MASPSSSSSFICKTHFLIDLIAILIVSCTHSSQVEAIKAPIRPQDILPLLPRQVSWPLLNSLRGASDLLPSFVGAASISNHSDLQWKGSCFYQNTAWLELHNKSGSEFGGGTLHIKVSNAHSWTCMDIYVFATPYRVTWDYYFLSREHTLEFDEWGGKAEYEYVKRKGVAIFLMEAGMLGTLKALWEVFPLFTNTGWGESSNLAFLKKHMGANFEARPEPWVTNITVDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAWWNFELTEDDANPHIALLPLHPDLRSKFNETAAWEYAQSMIGLPYGYHNLIFSWIDTISDNYPPPLDAHLVASVMTVWNHLQPAYAANMWNEALNKRLGTQGLDLPEILVEVERRGSSFAELLAIPEQDEWVYADGKSTSCVAYVLEMYKEAGLFGDLASQIQVTEFTDAYMLNFFENDSSRLPKWCNEGDTVELPFCQIKGKYRMELPGYNSMDPYPHMTESCPSLPPDYSRPDYC 501
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g02216 501 PANTHER OS01G0793500 PROTEIN 265 501 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g02216 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
38907 Ccar2g02216 Ccar6g00524
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
943502 Ccar Ccar12g00106 Ccar-Chr12:1332691 Ccar2g02216 Ccar-Chr2:69287119
944532 Ccar Ccar13g00184 Ccar-Chr13:2175229 Ccar2g02216 Ccar-Chr2:69287119
965447 Ccar Ccar2g02216 Ccar-Chr2:69287119 Ccar6g00594 Ccar-Chr6:16737341