AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g02217 ATGCATGATTTTTGCTTTACGATCCCCTACGGGATGATAGTCTTCTGTGGCGGGATTATAGGCTTTGCAAGAAAAGGAAGCACCACGTCCTTGGCTGGTGGCGCCGCTACTGGTTTATTGCTCTTCCTTGCTTCCTATCTCAGTCTCAATGCCTTCCACAAGCGAAAGAACTCATGGTTCGGCTTCATTCTCGAAACTGTATGTGCTGCTGTTCTCACATGGGTTATGGGACAACGATACACCGAAACTGCCAAGATAATGCCTGCTGGTGTTGTTGCTGGTATCAGGTATGTAATTCAGAAGTTCTCTTTTGGAAAAAAGATTGGTGACATCTGGAAAGCCATGGATTTGGTTCAAATATTTACAATTGGTGCGATGACAGCATTTTATCTGTACAAGATTGCCACAGGAGGTAACCATTTTTCCACCAAGACTGAATGA 441 44.22 MHDFCFTIPYGMIVFCGGIIGFARKGSTTSLAGGAATGLLLFLASYLSLNAFHKRKNSWFGFILETVCAAVLTWVMGQRYTETAKIMPAGVVAGIRYVIQKFSFGKKIGDIWKAMDLVQIFTIGAMTAFYLYKIATGGNHFSTKTE 146
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g02217 146 PANTHER TRANSMEMBRANE PROTEIN 14, 15 1 135 IPR005349 GO:0009706(PANTHER)|GO:0015245(PANTHER)|GO:0015908(PANTHER)|GO:0016020(InterPro)
Ccar2g02217 146 Gene3D - 1 107 IPR044890 -
Ccar2g02217 146 Pfam Transmembrane proteins 14C 6 96 IPR005349 GO:0016020(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g02217 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
951288 Ccar Ccar2g02217 Ccar-Chr2:69290393 Ccar9g00298 Ccar-Chr9:8825516