Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar2g02233	ATGGGTCGGATCCTCGGCGGGAAGAAGAAGGGACGACCATCTAATGCAGATCTACCACGTCGTAACTCTAGTGCTGAACCAGAGTCACAGCCACGGCGGAGCTGCCGCAGACGGAATGTTAGGTACAATTTTGACATCGATGATTATGTAGACGATGAGGAGTTCTACAAGGATGTTGGGAGGAGAGAGAAGAAGCTTAGGATGCTGCTTGGTGAATATGATTCCGACTCCAATCACTGCGAGGAGAGTTCGTCGTCTGATGAATATGATGAAGTTAAGCCGTCGAAGAAACGGAAAATTGACGCCGGTGATCGGGAATTCGATGGAGAAGATGATGAAATCGGAGAGACAAGAGGAGGAAAACTGGAAGAAGAAGAAGAAGATGATGATGCAGAAACAGGAAGGGCCAACTCTGTTCCTGGGACACCATCAGATCCTCCAAATGGGGTATTTTTGCCTGATAAAAAGACTCTAGAGTTAATACTAGACAAACTTCAAAAAAAAGATACTTATGGTGTTTTTGCTGAACCGGTTGATCCCGATGAGCTGCCTGATTACCATGCTGTGATAAAGCAGTCTATGGACTTTGCTACGGTTAGGAAAAAACTGGCAAAAGGAACTTATTTAACCTTGGAACAATTTGAGGTTAGTCCATATGATGTGATTCTAATATGCGCTAATGCAATGCAATACAATGCACCAGATACAATTTACTATAAACAGGCAAGCTCTATCCTGGAGCTGGCGAAAACGAAATTCCAGCGCCTAAACTTTATTGTCGATCACCCAATAAACTCAAGTTCATCACCACCTAAAAAGCAACCAAAGAGGTCGATGGTCCGAACCGTTCAGGAACCCGCTGGATCCGATTTGTCTGGAGAATTTCAAAATGTCTTATCTGCCCACACTAAGCCCCCTGATGATGGAAATCGGCGGACAACATTCAATATGTCAATTCAGCCGGTCATTGAGTCGGAGAGTGTATTTTCAACCTTCCAGGGTGAAAGCAAACAGCTTATTCCCGTTGGGCTGCATTCGGATAATTCTTACACTAGGAGCCTAGCTCGTTTTGCTGCAACTCTCGGATCGGTTGCTTGGAAAATTGCGTCCCGAAGAATCGAGGAGGCTTTGCCGGAAGGCATCAAATTTGGGCCTGGATGGGTTGGAGAATATGAACCACTTACAAGTCCTGTTCTAGTGATCAAAAACTGCACCTTGAAAGAATCTGATTTTCTTACGAGATATCTCGGTATCATTGATGTGAGAACCGACGACAAAGCTTCTAGGAACACAGCCGATGGTGATGAAAAACTTTCTAGAAACCCCGCTCGTAAACACGAGTCTCCTAAAGGATCGAGTTCAGAAATGGGACCCCCATCTGTTTCTTTTCTGCAAGCTAAACTTCGTGAAATGGCTAGTTCAAAGCATCCGCAACAGAACTCAGACTCGTTGAACTTAATGGAGCTTAATGCTTCCGATATCCAATCTCCTAGACCAGCAGGAGTAGTTTCAAGAAACAAAAATGTTTCATCGGTATCATATTTTAAGCATCCAAATCGTAACGATGATGGATCCGTGCCACAAAACTGGAAACCCGTTTCGGTTGTTTCAGACTGTAATACGATTGGCTCCAATGTCGGTCCTGTAAACACGAGTTTTCCCCAACAACAGGGTCTTGCTGATGCGGTTCAGATGACGAGCAAGTTAGCTCAGATTCATTCAAACGGTTCCATGGTTTGTCCACAAAGAGAAAATCCGAGTAACGTCGAGTGGATGTCCTTAGGAGGGGTTACCAGACCGCATGTAGCCGAAAACCGAAATTCCCACCACCACCGCCGCCAACACCATGTTTCACCGTTTCATGGTGAATTCCCTACTTCCATGGCTCAGCTTCAACAACCCGTCCACGGCTTCGTGAATGAGCCCCGGTTCCAAAACCGACAAGTGATTTTTCCTCGGCTTGTAACCGCAGATCTGTCGAGGTTTCAGGTACAGTCTCATTGGAGAGCGGTTAGCCCTCAAAAACCGCAGCAGCAACCACCAAGACCGAAACACCAAGAATCACGGCCGCCTGATTTGAACATAGGTTACCAGTCTCCTGTGAGACAGTAG	2112	45.79	MGRILGGKKKGRPSNADLPRRNSSAEPESQPRRSCRRRNVRYNFDIDDYVDDEEFYKDVGRREKKLRMLLGEYDSDSNHCEESSSSDEYDEVKPSKKRKIDAGDREFDGEDDEIGETRGGKLEEEEEDDDAETGRANSVPGTPSDPPNGVFLPDKKTLELILDKLQKKDTYGVFAEPVDPDELPDYHAVIKQSMDFATVRKKLAKGTYLTLEQFEVSPYDVILICANAMQYNAPDTIYYKQASSILELAKTKFQRLNFIVDHPINSSSSPPKKQPKRSMVRTVQEPAGSDLSGEFQNVLSAHTKPPDDGNRRTTFNMSIQPVIESESVFSTFQGESKQLIPVGLHSDNSYTRSLARFAATLGSVAWKIASRRIEEALPEGIKFGPGWVGEYEPLTSPVLVIKNCTLKESDFLTRYLGIIDVRTDDKASRNTADGDEKLSRNPARKHESPKGSSSEMGPPSVSFLQAKLREMASSKHPQQNSDSLNLMELNASDIQSPRPAGVVSRNKNVSSVSYFKHPNRNDDGSVPQNWKPVSVVSDCNTIGSNVGPVNTSFPQQQGLADAVQMTSKLAQIHSNGSMVCPQRENPSNVEWMSLGGVTRPHVAENRNSHHHRRQHHVSPFHGEFPTSMAQLQQPVHGFVNEPRFQNRQVIFPRLVTADLSRFQVQSHWRAVSPQKPQQQPPRPKHQESRPPDLNIGYQSPVRQ	703

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar2g02233	703	Gene3D	-	153	263	IPR036427	GO:0005515(InterPro)
	Ccar2g02233	703	SMART	bromo-6	147	258	IPR001487	GO:0005515(InterPro)
	Ccar2g02233	703	MobiDBLite	consensus disorder prediction	1	38	-	-
	Ccar2g02233	703	ProSiteProfiles	Bromodomain profile.	166	239	IPR001487	GO:0005515(InterPro)
	Ccar2g02233	703	MobiDBLite	consensus disorder prediction	668	703	-	-
	Ccar2g02233	703	MobiDBLite	consensus disorder prediction	71	105	-	-
	Ccar2g02233	703	MobiDBLite	consensus disorder prediction	427	460	-	-
	Ccar2g02233	703	MobiDBLite	consensus disorder prediction	71	152	-	-
	Ccar2g02233	703	PRINTS	Bromodomain signature	199	217	IPR001487	GO:0005515(InterPro)
	Ccar2g02233	703	PRINTS	Bromodomain signature	220	239	IPR001487	GO:0005515(InterPro)
	Ccar2g02233	703	PRINTS	Bromodomain signature	183	199	IPR001487	GO:0005515(InterPro)
	Ccar2g02233	703	PRINTS	Bromodomain signature	169	182	IPR001487	GO:0005515(InterPro)
	Ccar2g02233	703	PANTHER	BROMODOMAIN CONTAINING PROTEIN	8	292	IPR051831	-
	Ccar2g02233	703	Pfam	Bromodomain	161	243	IPR001487	GO:0005515(InterPro)
	Ccar2g02233	703	CDD	Bromodomain	154	253	-	-
	Ccar2g02233	703	MobiDBLite	consensus disorder prediction	427	451	-	-
	Ccar2g02233	703	SUPERFAMILY	Bromodomain	139	256	IPR036427	GO:0005515(InterPro)
	Ccar2g02233	703	MobiDBLite	consensus disorder prediction	264	291	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar2g02233	K22184	bromodomain-containing protein 9

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	944837	Ccar	Ccar13g00629	Ccar-Chr13:8282898	Ccar2g02233	Ccar-Chr2:69389327
	949930	Ccar	Ccar1g02532	Ccar-Chr1:48965322	Ccar2g02233	Ccar-Chr2:69389327
	951298	Ccar	Ccar2g02233	Ccar-Chr2:69389327	Ccar3g00325	Ccar-Chr3:3356918
	965451	Ccar	Ccar2g02233	Ccar-Chr2:69389327	Ccar6g00584	Ccar-Chr6:16626170