Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar2g02244	ATGCAAAACAATAGGTGGCAGTTTAACCTGTCGTTTTCTTCCACGTGTCCTTCCTCCTTCAGAGTTGCCGGCCGGAGAGAATTCCGGCAAGACAATCTGGGAAAGCACGGCGAGTTGTTGTTGGACGGGATTTTCGACTGCTTCCATGAAATCACAACGGCGTTGGCTTTCGCTAGGATGAACGATTCGGCTTATCGGGTGGATACGACTTCACGCCTTGCTCAATGGCGAATCGACAACTTGGCGGCTTTTACGTACCGGAAATCGAATCCGTTTCGGATCGGGAAATGGAATTGGCATTTAGCTGTGGAGAAGAATCGAACCTTATTGATTAAGCTGTATCCAGAGATATCAAATTTAACTCAAGACGGCCCTCCGATTGTTTCCTTCATCATTCGACTCGTCTCGTTATCCGAAGGTCGCAAGGTTTTGGTTCATCCCGAAATTAGGGATAAACAGCTAAAAAGTAGCGATGATTTTGTTTGGGCACTCGAGGTTCCATTCACAGGGAAGTTCATCATCGATGGCGGTGAATCGTGCTCCATCTGGGCGGAAGGGGTGGCGCAAAAGGAATCATATGCAACCGCCCTTACCTCTCTTGGTCGAATGCTATCAGAAAGCATTCACACAGATATCATCATCAATGCTGCCGATGGAAGCATTGGGGCCCACCGTGCAGTCCTTGCTGCACGGTCCCCAGTCTTTTATAGCATGTTCTCTCATGACTTGAAAGAAAAAGAGCTCTCCACCATTAACATTCCTGATATGTCCATTGAAGCTTGCCAAGCTTTTCTCAGCTCATTATACGGTAACATAGGGAACAAAGATTTTCTCACTTACAGGCTCGATCTTCTTAGAGCGGCTGATAAGTACGAAGTTTTGGACCTAAAAGAGGCGTGTCACGATAGTCTTTTGGAAGATATCAACACAAAGAACGTGTTGGTGAGGCTCCAAAACGCTAAATTATACAGTCTACAAAGGCTGAAGATTTGTTGCATGCATTATCTCGTTAAGTTCGGTAAGATATACGAGATTCAAGAAGAATTCAGTACATTTATACAATCGGGAGACAGAGAACTGATATGGGAAGTCTTTAATGAAGTTCTTTCCATATGGAAAGGTTTCTGA	1128	44.95	MQNNRWQFNLSFSSTCPSSFRVAGRREFRQDNLGKHGELLLDGIFDCFHEITTALAFARMNDSAYRVDTTSRLAQWRIDNLAAFTYRKSNPFRIGKWNWHLAVEKNRTLLIKLYPEISNLTQDGPPIVSFIIRLVSLSEGRKVLVHPEIRDKQLKSSDDFVWALEVPFTGKFIIDGGESCSIWAEGVAQKESYATALTSLGRMLSESIHTDIIINAADGSIGAHRAVLAARSPVFYSMFSHDLKEKELSTINIPDMSIEACQAFLSSLYGNIGNKDFLTYRLDLLRAADKYEVLDLKEACHDSLLEDINTKNVLVRLQNAKLYSLQRLKICCMHYLVKFGKIYEIQEEFSTFIQSGDRELIWEVFNEVLSIWKGF	375

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar2g02244	375	Pfam	BTB-POZ domain	203	306	IPR000210	GO:0005515(InterPro)
	Ccar2g02244	375	CDD	BTB-POZ-ZBTB-KLHL-like	209	291	-	-
	Ccar2g02244	375	ProSiteProfiles	BTB domain profile.	210	269	IPR000210	GO:0005515(InterPro)
	Ccar2g02244	375	Gene3D	Potassium Channel Kv1.1; Chain A	186	338	IPR011333	-
	Ccar2g02244	375	SUPERFAMILY	POZ domain	195	306	IPR011333	-
	Ccar2g02244	375	PANTHER	OS08G0495500 PROTEIN-RELATED	64	374	IPR044714	-
	Ccar2g02244	375	SMART	BTB-4	210	308	IPR000210	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar2g02244	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	37919	Ccar17g00042	Ccar2g02244

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ccar	Ccar-Chr6:15344381	Ccar2g02244	Ccar-Chr2:69508137	transposed
	Ccar	Ccar-Chr17:288801	Ccar2g02244	Ccar-Chr2:69508137	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Ccar	BTB	4.7e-21	CL0033		TR	TRAF