AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g02252 ATGAGGAAATTGGAGGATGGCAATCCATCACGGAAGTACCAGAAATTCGCTCTAATAATCGGAGTCACCGGCATCGTTGGGAACAGCCTCGCCGAGATCCTACCACTCCACGACACCCCCGAAGGTCCCTGGAAAGTCTACGGAGTTGCTCGCCGCCCACGACCATCGTGGAACGACGATTACCCTATAGACTATATCCAATGCGACGTTAGCGATCCTGAACAAACCCAATCCAAACTCTCGACCCTAACAGACCTCACTCATCTTTTCTACGTCACATGGGCCAATTGCGAAACCGAGTCCGAAAACTGCGACATCAATGGCAAGATGTTCACCAATGTCCTTAATGCTGTAATCCCGAACGCCCCAAATTTACAACATATTTGCTTGCAAACTGGTCGTAAGCATTACATCGGATCACTAGAAGCCATTATGGCGAAAAAATTCGTTCACGATCCACCTTTTCACGAAGATCTTCCCCGACTCGATTCCCCTAATTTCTACTACACACTCGAAGACATCCTCTTCAAAGAAGTCGAAAAGAAGGAAGGACTAACATGGTCCATCCATCGACCCGGGGTCATTTTCGGGTTTTCACCCAACAGTATGATGAACATTCTACTAGGTCTATGCGCCTACGCATCAATTTGCAAACACGAAGGTCAACCACTGACGTTTCCAGGAACCAAAGAAGCATGGAACAGCTTCACCGACGCTTCGGATGCCGATCTGATCGCCGAGCACCAAATCTGGGCGGCGGTCGATCCGATCGCAAAGAACGAAGCGTTTAACATCAGTAACGGGGACGTTTTCAAGTGGAAGCATTTGTGGAAGATTCTGGCGGAGCAATTCGAGGTCGAAAACGGCGGGTTTCGGGAAGACGGAGAGAAGAAAAGCTTGGGGGAGATGATGAAAGATAAAGGGGGTGTTTGGGATGAGATAGTGAAGGAGAAGGGCCTTTTGGTAAATAAGTTAGAGGAGGTTGGAAAGTGGTGGTTTGTGGATGTTGTTCTAAGTAATGAAGGGATGTTGGATATAATGAATAAGAGCAAAGAACATGGATTTTTAGGGTTTAGAAATACAAAATCATGCTTTGTTTCTTGGATTGATAAGATTAAGTGTTCCAAGATTGTGCCCTAG 1140 46.67 MRKLEDGNPSRKYQKFALIIGVTGIVGNSLAEILPLHDTPEGPWKVYGVARRPRPSWNDDYPIDYIQCDVSDPEQTQSKLSTLTDLTHLFYVTWANCETESENCDINGKMFTNVLNAVIPNAPNLQHICLQTGRKHYIGSLEAIMAKKFVHDPPFHEDLPRLDSPNFYYTLEDILFKEVEKKEGLTWSIHRPGVIFGFSPNSMMNILLGLCAYASICKHEGQPLTFPGTKEAWNSFTDASDADLIAEHQIWAAVDPIAKNEAFNISNGDVFKWKHLWKILAEQFEVENGGFREDGEKKSLGEMMKDKGGVWDEIVKEKGLLVNKLEEVGKWWFVDVVLSNEGMLDIMNKSKEHGFLGFRNTKSCFVSWIDKIKCSKIVP 379
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g02252 379 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 283 IPR036291 -
Ccar2g02252 379 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 11 379 - -
Ccar2g02252 379 Gene3D - 15 379 - -
Ccar2g02252 379 CDD 5beta-POR-like-SDR-a 17 319 - -
Ccar2g02252 379 FunFam Iridoid synthase 13 379 - -
Ccar2g02252 379 Pfam PRISE-like Rossmann-fold domain 77 379 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g02252 K22419 Delta4-3-oxosteroid 5beta-reductase [EC:1.3.1.3]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr2:9569285 Ccar2g02252 Ccar-Chr2:69573402 dispersed
Ccar Ccar-Chr2:9569584 Ccar2g02252 Ccar-Chr2:69573402 dispersed
Ccar Ccar-Chr2:69573402 Ccar8g00732 Ccar-Chr8:20451948 dispersed