AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g02266 ATGATATCCATTGATGGTCATCCACCACCAGATCCTTCATCATCTCATCATCATCATCATCATCAAGAACAACAACAAATCTCTCATGATCATCTCAAGATCAAGATCAACAGTGATGATTATAAAGCTTCTGTTTCTGTTTCTGATTTAGATCTGAAGTCACCAGATGCTGCTGATGATCTTGATGACACCCACAACAACCCACTTCCAAATTTCTCTATAAGGGATCATGTTTTCAGTTTAAGAAGCAAAGATGTTGCTTGTAATTGGCCTTTTTCTCCAAAAAGTTTGCAAATTTGCTTGAGAAATGGAGTGAAGAACTTGTTGCCACCTTTCCAGCCTCTTGTTTTACTGAGGGATAACAACAGATGCAATCTTGAAAACCATTTGGCATCAAATGAAGATGTCGTAAGCGGGTTTGATGGGAAACGCGTGGAAGATCGATCCAAACCGGTCACTTGTGATGCTGCGAAATCGATCTGCGAGCTAACCGTGAGGTCTGTAAGCACGAATTCAAGTGGTTCGAAAGAAAATTACAAGGAATCCAACACGAGATCGAAGGAAAAACCTCCGGCTTCTTGTTCTTCTCAGAAAAAGAGTAGATTGGTTTTGAAATTGAATTCTGGGGTGGAACCGGTTGATCAGTTAGAGATTCCTCCAAACAGTTTCGTCATTTCTGAAACCATGGCGTCGAAAGTTTGCCCGGTTTGTAAGATTTTCTCTTCGTCTTCAAACACAACGTTAAACGCTCATATCGACCAGTGTTTAACCGGGGAGGCGAGTATGAAGTGGACCGACAATCCGAAGGTTATAGTCAAACATAGGATCAAACCTAGGAAAACAAGATTAATGTCGGATATATACGAAACAGCTCCACGTTGTACTGTCGAGGAGCTCGATAGAAGAAACGGTACAAGCTGGGCTACTAATTCTAGTTTTCCCGCTCAAGAATTCCAGTTTCAAGAGGAGAAAGAAGAGCCGAGATTAACGACTACCATCAATCCTGAAGTTGCTGATAACGAAGGTGATGTTTATATCGACACCGATGGCACAAAAGTTCGGATTTTGTCGGTCCCAAAAGCGGGTTCATCGGATAATAATGGAGCTCGGAAGTTACTGAAAGGTGTAAAAGGGTGTAAAATCGTTATAGGTAAGAAGAAAAGCAATTTTTTTAAGGCGAAACATCACCAGAAGTTTCTGAAACTTGGCTTGAATGCCGGAAAATTATGCTCGCCAAAGCCCTCGAAATCTCGTTGTCCTTCTGAGATTGTTGAACAGATAAGAAGCAGTGAGAAAGAAGATGTTACCATGGCGGAAGATTGCCGGAAAGAGGAAGGAGGCAGAGAGCCGATGAAAGCTCCGGCGGGTTTGGCCATCATAAGACCGCCGTGGGCGTGCTCGAAGAGAACCGGTCTCGGAAAGAAGTTCAGCGGCAAGCAGCGGAAGATGGAATTACGAAAAGATTTTCTTGTTGAAAGTGAGAAATCTTCTTCCGGATGTGATTTCAGAACTCCAATTTCATCTAATAAGATGGATTCTTCACAAATTCGGAAGAAAACGAGAACTTCATTGCCGTTAACAAAGCCAAGTTTGAAGCTTTTGAGGCAAGAAGACGATGATTCTTCGGGTTCTCGAGATTCATATCCATCCCAACACTCTGATGGTCCTGAAATCAGACCTATGATGAACACGAAGTTTTCATCTTTGAGAAAGAATCTATCTTTTTCGGCATCCAAGACTAGTTTAAAACGGAAATTTTCCGCTTTCAAGAAATCCCATGTTGTTCGTTGCTTACCGAACGAAAAATCAGTTGACGGGTCGTCTCAGAATTCTCCAAAAGGTCAATCTAAAACGGAAGACGACGACACAGGTGCTAGAAAGGAGAGATCAATTACTTCCAAGAGTTCAAATGGAGATCAATCTTCTGTGGGAATTGAAACCACCATCGAGGATGCTTTACGGGATGTAGAATCCGTTAGAAACGAGAATCAACCCGATGGCGATCAAGTTTGTGCTGTTCCAGCCTCGAGAATGATCGATGACGATAGAAATCTAATGGATTTGAGCAATTCTTTTGATCCTGAGTTCTCGAAACTGGTCAGTGATGATAAGCTATATCCGGATCAGATATGTTCGACTAATCGAGCTCCAGACGGGAAAAATATATTCGGAAATGATATCGAAGATGGCACAGAGGATATCGAAAAGAATCAAGATTACTTTCAGGAGGTTGACCCTATTCCGATTCCTGGACCACCGGGATCATTCTTGCCTAGTCCCGGTGGAGATATGGTTTCCGATGAGATTCAACCAATTAGGGTTCCGCCAAGTGAAAACCCGCATAATCTCGATACGATCGATCGAGATTCCATGTCGAATTCTCCGGTTTCAACAGTTTCTAATCCTAGTATGGCAAGATCAGATTCAAGATCTTCAGAAAAGTTATCTTACAGATCTAGTTCTGTTCAAGATGATCAAAGGCCAGGTTTTTCAAGTGTTATGATTGAACCCACTTTCAAGAAATCTTTTCCTAACAGTGGCGGGGCCGGAGGCGGGGGCGATTGGAGACCCGTTGATCATATCGAAAAGGGTCCTTCTCCGACCAGTTTCAAGAACGACCAGCCGTGCTGTTGCTCGAGAAAAGAGACCGTTTCATCGTATTCAGTTGCTTCACACTATCAAGATTCGTCTTCTTTAAGGAAACAACAATCGATCGAGCCATCCAGAAGCCCAAACGGTTTAAACTTCAGATCCGAATCGATGTTCTTGCTAAACAACTACCCGAATTCACAACCACCCGACACCATGGTATTTCCAACGATCACCAAGAAGTTGTCGTCGGCTGCCGGCTTACCCGTTAAGCTGCCGATTTACAGCGATTGCGATTCGGCCGTTAGTCCTTCGAAACCCGTTCTTCGATTGATGGGAAAAAACTTAACCGTCGTCAAGACCGATGACGATGTATCGTCATCATCTTCACAACAGTTTCGACCTCAGATGAATCAACTGGTTCATAGTTCTTTCTCCCATGGCTACCCTCACCGGCCGGTGATCTTTAGCCAGTACCAGAATGGGTCTGAATCTAACCATTTCAATGGCCAACCACCGGTCAATATGAGAAGCTTCATGGCGGATCGTTATTGTCACGCTGTTCCAAATATGGGACCGATGGTACCTCCCGCGAGGTCCTACAATGGCTATAATGGAGTCCATTCACAAACGCCACGTGGCAGAAATCTGTATAATGCTGCTGCATCCAGCTCGAACCCCATTAAAGAAATCATCATCATTGATGATTCCCCTGAAAATGAGGCTGATGATTCTACGCGAAATGATCAATTCTTGAGAAGAAATCAGTTTTACACAATGAACCAATCACAGGGTTCCGATTACCATCCGTACGGTGGCGGTCCGGCGGTGTTTCGTGCCGGTGGTTTTCAAACTTCTTCAGGCATGATGCATATGGGATCATCATCACCATCACCATCGAATTCGACATCCCATTTGCGATCTTCGACTGCATACTATCCTCCGAGTTATCCATGA 3546 43.65 MISIDGHPPPDPSSSHHHHHHQEQQQISHDHLKIKINSDDYKASVSVSDLDLKSPDAADDLDDTHNNPLPNFSIRDHVFSLRSKDVACNWPFSPKSLQICLRNGVKNLLPPFQPLVLLRDNNRCNLENHLASNEDVVSGFDGKRVEDRSKPVTCDAAKSICELTVRSVSTNSSGSKENYKESNTRSKEKPPASCSSQKKSRLVLKLNSGVEPVDQLEIPPNSFVISETMASKVCPVCKIFSSSSNTTLNAHIDQCLTGEASMKWTDNPKVIVKHRIKPRKTRLMSDIYETAPRCTVEELDRRNGTSWATNSSFPAQEFQFQEEKEEPRLTTTINPEVADNEGDVYIDTDGTKVRILSVPKAGSSDNNGARKLLKGVKGCKIVIGKKKSNFFKAKHHQKFLKLGLNAGKLCSPKPSKSRCPSEIVEQIRSSEKEDVTMAEDCRKEEGGREPMKAPAGLAIIRPPWACSKRTGLGKKFSGKQRKMELRKDFLVESEKSSSGCDFRTPISSNKMDSSQIRKKTRTSLPLTKPSLKLLRQEDDDSSGSRDSYPSQHSDGPEIRPMMNTKFSSLRKNLSFSASKTSLKRKFSAFKKSHVVRCLPNEKSVDGSSQNSPKGQSKTEDDDTGARKERSITSKSSNGDQSSVGIETTIEDALRDVESVRNENQPDGDQVCAVPASRMIDDDRNLMDLSNSFDPEFSKLVSDDKLYPDQICSTNRAPDGKNIFGNDIEDGTEDIEKNQDYFQEVDPIPIPGPPGSFLPSPGGDMVSDEIQPIRVPPSENPHNLDTIDRDSMSNSPVSTVSNPSMARSDSRSSEKLSYRSSSVQDDQRPGFSSVMIEPTFKKSFPNSGGAGGGGDWRPVDHIEKGPSPTSFKNDQPCCCSRKETVSSYSVASHYQDSSSLRKQQSIEPSRSPNGLNFRSESMFLLNNYPNSQPPDTMVFPTITKKLSSAAGLPVKLPIYSDCDSAVSPSKPVLRLMGKNLTVVKTDDDVSSSSSQQFRPQMNQLVHSSFSHGYPHRPVIFSQYQNGSESNHFNGQPPVNMRSFMADRYCHAVPNMGPMVPPARSYNGYNGVHSQTPRGRNLYNAAASSSNPIKEIIIIDDSPENEADDSTRNDQFLRRNQFYTMNQSQGSDYHPYGGGPAVFRAGGFQTSSGMMHMGSSSPSPSNSTSHLRSSTAYYPPSYP 1181
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g02266 1181 MobiDBLite consensus disorder prediction 1151 1181 - -
Ccar2g02266 1181 MobiDBLite consensus disorder prediction 1 29 - -
Ccar2g02266 1181 PANTHER HAPLESS PROTEIN 1 1180 - -
Ccar2g02266 1181 MobiDBLite consensus disorder prediction 170 199 - -
Ccar2g02266 1181 Gene3D Classic Zinc Finger 233 259 - -
Ccar2g02266 1181 MobiDBLite consensus disorder prediction 497 561 - -
Ccar2g02266 1181 MobiDBLite consensus disorder prediction 497 529 - -
Ccar2g02266 1181 MobiDBLite consensus disorder prediction 615 633 - -
Ccar2g02266 1181 MobiDBLite consensus disorder prediction 786 828 - -
Ccar2g02266 1181 MobiDBLite consensus disorder prediction 893 913 - -
Ccar2g02266 1181 MobiDBLite consensus disorder prediction 11 29 - -
Ccar2g02266 1181 MobiDBLite consensus disorder prediction 600 645 - -
Ccar2g02266 1181 MobiDBLite consensus disorder prediction 747 876 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g02266 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
37909 Ccar17g00026 Ccar2g02266
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr17:177580 Ccar2g02266 Ccar-Chr2:69673110 wgd