AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g02277 ATGAATCTTGCGAGCTTGGTGCGAGCCTCATCTCTCTCAGCCACATCCACATCAAGAATTCTCCATCGCTCCATCGCGATTAGACCCTTTTCTTGTTGTTCGATTTCGAATATACCCATTTCAATAAACCCTAAAACCCCAATTTTTCTCAGACCACCCACCTTCTCCGCAACCCTATCCGACCTCCAAAAGTGGCAAAATTGGGCGAAAACCTTAGCCTCCTCAGTCGGGTCATCCTTCACGGATTCAGATAACGGTCCGGACTCTCACAATTTGCACAGAGAACTCAATTGGCTCATCGAAGACGCTCTAGAAAACCCCCAATCGTTATTAACTAGCAACGAATATGAAATCGATTCTGTTTTGAATCTAAGAGCTGATTTGGGTGATCTGTACTCATTATGGAAGCAAAGGATTGAACAGAGAAGGCCATTTCAGTATGTAGTAGGGTGTGAGCATTGGAGGGATTTGGTGCTAAGTGTTGAAGAAGGGGTTTTGATTCCAAGGCCTGAGACTGAATTAATAGTTGATTTGGTGGATGATGTGATTAAGGAGAATGAAGAATTGAAGGAGGGTTTATGGGTTGATTTGGGGACTGGTAGTGGTGCAATTGCAATTGGGATTATGAGGATTTTAGGGGATTTTGGGAGAGTTATTGCAATTGATTTAAGTTCTGTTGCTGCTCAAGTTGCTTCATTCAATGTCAAAAGGTATAATTTGCAGGGAAGAACGGTGACGATGGTTTTGGCCTCGATCGATAAAATTTCTGTAAAGCAAGGGTCATGGTTTGAACCGTTGAGTGAGTTTGAAGGACAAGTTGCAGGCCTTGTAAGCAATCCACCATACATACCGAGTGGCCACATCAGTGGACTCCAAGCCGAAACAAATGGTGAAGATCAATGCAGGTTTCTTGTGGACCATATGGAAACCGTTTACGATGGCAGTTTCTACAATCTAAAGATCGTACCAGATTTTGCTGGCATTGATCGTTTTGTCACTGGGATTAGATCATAA 1014 43.1 MNLASLVRASSLSATSTSRILHRSIAIRPFSCCSISNIPISINPKTPIFLRPPTFSATLSDLQKWQNWAKTLASSVGSSFTDSDNGPDSHNLHRELNWLIEDALENPQSLLTSNEYEIDSVLNLRADLGDLYSLWKQRIEQRRPFQYVVGCEHWRDLVLSVEEGVLIPRPETELIVDLVDDVIKENEELKEGLWVDLGTGSGAIAIGIMRILGDFGRVIAIDLSSVAAQVASFNVKRYNLQGRTVTMVLASIDKISVKQGSWFEPLSEFEGQVAGLVSNPPYIPSGHISGLQAETNGEDQCRFLVDHMETVYDGSFYNLKIVPDFAGIDRFVTGIRS 337
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g02277 337 Pfam Ribosomal protein L11 methyltransferase (PrmA) 172 244 - -
Ccar2g02277 337 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 288 IPR029063 -
Ccar2g02277 337 CDD AdoMet-MTases 195 287 - -
Ccar2g02277 337 ProSitePatterns N-6 Adenine-specific DNA methylases signature. 276 282 IPR002052 GO:0003676(InterPro)|GO:0008168(InterPro)|GO:0032259(InterPro)
Ccar2g02277 337 PANTHER - 294 336 IPR052663 -
Ccar2g02277 337 Gene3D Vaccinia Virus protein VP39 159 337 IPR029063 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g02277 - -