AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g02300 ATGAATAGGGTACCACCAAATACGAGCATGGAGACGGCAAAACAACAATTCTTGAAAGAATTCGGTGAATCTTACGGTTATCCGAACGCCCCCAAGAACATCGATGACATCCGAGCTACGGAATTTAAAAGACTTGATGGGAATGTGTACTTGGATCATGCTGGTGCAACTTTGTATTCTGAATTACAGATGGAAGCAATATTTAAAGATCTTACCACCACTGTATATGGAAATCCCCGGATATTAGATAGTCAAAGCAGCTCTAGCCTGGCCACTTCAGACGTTTTAGAAGATGCTCGTAATCAGGTTCTCAAAATCTGTAATGCATCTCCAAAAGAATATAAATGTATATTCACTTCGGGGGCAACAGCAGCTCTTAAACTTGTTGGGGAGGCCTTTCCTTGGAGCAGTCAGAGCACTTTCATATATGCTCTCAATGAAGGAGCTGCAGCATTAGCAATAGACTTTAGGGAAGCTACAAAATCTGATACATGTAGAAGCACTAGATCTTCTATCAAGGTTTTCCAGCATCCTCTACAAAAGAGAAGCGAAGCTAGGGTATTAGATGAAGAACCTACTGGCCATACATACAATTTATTTGCTTTCCCCTCGGAGTGTAATTTCTCAGGAGTGAGGTTTAATCTTGATTTGATAGACATAATTAAGGAAGATTCAGAGCGAATATTGGAAGGCGCTCGACATTGCAGGGGATGTTGGATGGTTTTGCTTGATGCTGCAAAAGGATGTTCCACAGACCCTCCAGATTTATCAAAGTATAAGGCAGACTTTGTTGTCATCTCATTCTACAAGCTTTTTGGCTATCCAACCGGACTTGGAGCTTTGATAGTTCGAAATGAAGCTGCAAAGTTACTAAAGAAGACCTACTTTAGTGGAGGCACGGTGGCTGCATCAATTGCAGACATGGACTTTGTGAAAAGAAGAGAAGGCATTGAGGAGTCATTTGAAGATGGAACACTATCATTCTTAAATATAGCATCCATTCGTTATGGATTGGATATCATAAATACTTTGAGCACATTAGCCATATCACGCCATACATCATCACTTGCCAGATATACGAGGAATATGCTTTTGGCATTAAGGCATGCAGATGGGGAGGAGGTTTGCAAAATATATGGTCTCGATTACTTAAAGGCATCATACAGCGGACTTGGTTCTGTAGTTTCTTTCAACTTGAAAAGGTCTGATGGTTCTTGGATTGGCTACCGTGAAGTGGAGAAACTGGCTTCTTTATCTGGAATTCAACTACGGACAGGATGCTTTTGCAATCCTGGTGCATGTTCCAAGTATCTTGGTTTATCTCATTCAGATCTTCTATCCAACATTGAGGCTGGGCATGTTTGCTGGGATGACTATGATATATCAAATGGGAAACCAACTGGAGCTGTTAGAGTTTCTTTTGGCTATATGTCGACATTTGAAGATGCCTGGAAATTCATGAACTTCATTGTAAGCTCTTTTGTCTTGTTGCCCACCGATACTAGACATCTTAATCCATTGAGATCCGGCTCTATCCAGCCCGCCATGGAAGGATTGTTATATGATCGAGAGTGGCTTCTCAAAAGTATCAATGGTGAAATTCTTACACAGAAGAAGGTACCTGAAATGTACTATATCGATACAAAGATTGACCTCAAATTGGGAATACTTCATGTGGAATCTCCTCGATGCAAGGAGAAGCTGCTTATCGAACTTGAATCGGATTTTTTTCCTGCAGTAGAAGAAATCAATGTACATGCCCAAAGATATGAAGTTCTGGGCTATGATAATAAGATAGACACTTGGTTCAGCAATGCAGTTGGCCGACCTTGTTATTTATTAAGATCTAGTTCCAGAAATGGTATCTGCTTGAACAAGACCAAAAGCATGGGCAGATGCAGAGACGTGAATACCAGATTAAACTTTGTTAATGAAGCTCAGCTTTTACTGGTATCCGAGGAAAGCATATCTAACCTCAACCATAAATTAAACTCAAGTAGACAGGAAGGATCTGTTGGATTAAGAATGCAAGTTGATGCAATGAGATTCCGGCCCAACCTTGTGGTATCTGGTGGTGAGCCATATGCTGAAGATGGGTGGAGTAGTCTTAAGATCGGAGGCAATCACTTCATGGGTAAGATTCTGTTTGGAATTTTACTGAGATATGAGCATGACAATGAGGGTGGAGAAGAAATGTCTTCATGGCTTCAAGTAGGACAAGAAGTATACCCTGATCAGGTATTAATGTTGTTTGACTTGTGA 2262 40.76 MNRVPPNTSMETAKQQFLKEFGESYGYPNAPKNIDDIRATEFKRLDGNVYLDHAGATLYSELQMEAIFKDLTTTVYGNPRILDSQSSSSLATSDVLEDARNQVLKICNASPKEYKCIFTSGATAALKLVGEAFPWSSQSTFIYALNEGAAALAIDFREATKSDTCRSTRSSIKVFQHPLQKRSEARVLDEEPTGHTYNLFAFPSECNFSGVRFNLDLIDIIKEDSERILEGARHCRGCWMVLLDAAKGCSTDPPDLSKYKADFVVISFYKLFGYPTGLGALIVRNEAAKLLKKTYFSGGTVAASIADMDFVKRREGIEESFEDGTLSFLNIASIRYGLDIINTLSTLAISRHTSSLARYTRNMLLALRHADGEEVCKIYGLDYLKASYSGLGSVVSFNLKRSDGSWIGYREVEKLASLSGIQLRTGCFCNPGACSKYLGLSHSDLLSNIEAGHVCWDDYDISNGKPTGAVRVSFGYMSTFEDAWKFMNFIVSSFVLLPTDTRHLNPLRSGSIQPAMEGLLYDREWLLKSINGEILTQKKVPEMYYIDTKIDLKLGILHVESPRCKEKLLIELESDFFPAVEEINVHAQRYEVLGYDNKIDTWFSNAVGRPCYLLRSSSRNGICLNKTKSMGRCRDVNTRLNFVNEAQLLLVSEESISNLNHKLNSSRQEGSVGLRMQVDAMRFRPNLVVSGGEPYAEDGWSSLKIGGNHFMGKILFGILLRYEHDNEGGEEMSSWLQVGQEVYPDQVLMLFDL 753
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g02300 753 SUPERFAMILY MOSC N-terminal domain-like 506 619 - -
Ccar2g02300 753 Hamap Molybdenum cofactor sulfurase [MOCOS]. 24 744 IPR028886 GO:0006777(InterPro)|GO:0008265(InterPro)
Ccar2g02300 753 Pfam MOSC N-terminal beta barrel domain 516 610 IPR005303 -
Ccar2g02300 753 SUPERFAMILY PLP-dependent transferases 38 491 IPR015424 -
Ccar2g02300 753 Gene3D Aspartate Aminotransferase, domain 1 339 495 IPR015422 -
Ccar2g02300 753 ProSiteProfiles MOSC domain profile. 615 753 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Ccar2g02300 753 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 11 495 - -
Ccar2g02300 753 Pfam Aminotransferase class-V 49 483 IPR000192 -
Ccar2g02300 753 Gene3D - 64 338 IPR015421 -
Ccar2g02300 753 Pfam MOSC domain 638 709 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g02300 K15631 molybdenum cofactor sulfurtransferase [EC:2.8.1.9]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr2:70103364 Ccar5g01368 Ccar-Chr5:34224935 transposed