AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ccar2g02313 | ATGGCATCCGCCTTTCTTTCAAGAACTTTCTTTGCAAATCGTGTTGTTTCGTCTTTCGCCCTCAATCAAAAGCCCCAAAAATTGGCGTCCCTTCTCTTTAAGAAACCCCTTCATTTGTGGGCTTCCTCATCTCGTATGGCGTATATGAGTACTTCCTCAATTCGTAGTGACATGGCTTCAACCGCGGTTGGATCTACAGCTACTTTTTTAACACAGTCCATGTCGACTACCGAGCCTGTTGTTTCAGTTGACTGGCTCCATGCCAATCTGCGTGAACCTGATATCAAGGTGTTGGATGCATCCTGGTACATGCCTGATGAACAGAGAAATCCACTTCAAGAGTATCAGGTTGCCCACATTCCTGGTGCTCTTTTCTTTGATGTAGATGGGATATCAGACCGAACCACTAATCTGCCACACATGTTGCCATCCGATGAAGCATTTGCTGCTGCTGTTTCTGCTCTTGGTATTGAAAACAAAGATGGAGTTGTTGTTTATGATGATGGAGGCCTCCCCAGATGGCGTGCCTCGGGATTTGATGTTGAATCCAGTGCTTCTAGTGATGCAATATTGAAGGCTAGTGCTGCAAGTGAGGCAATAGAAAAAGTATACCATGGGCAGGCTGTTGGTCCAGTTACATTTCTAACAAAATATCAGCCACATCTTGTATGGACACTTGAACAGGTTAAAAAGAATACAGAGGAACAAACACATCAACATATAGATGCCCGGTCAAAGGCCAGGTTTGATGGTGTTGCAGCCGAGCCTCGAAAAGGAATAAGGAGTGGCCATGTGCCCGGGAGTAAATGTGTTCCTTTTCCGCAGATGTTAGATGCCTCACAGACACTACTATCAGCAGACCAGCTTACGAAAAAGTTCGAACAAGAGGGAATCTCATTGGACAACCCTGTTATTACGTCATGTGGCACCGGAGTTACCGCATGCATTCTTGCATTGGGACTCCATCGACTCGGGAAGACCAATGTTCCAGTTTATGATGGATCATGGACCGAATGGGGAGCACAAGAGGATACTCCTGTCTCAACTTCAACCTCAACTTCTTGA | 1065 | 45.73 | MASAFLSRTFFANRVVSSFALNQKPQKLASLLFKKPLHLWASSSRMAYMSTSSIRSDMASTAVGSTATFLTQSMSTTEPVVSVDWLHANLREPDIKVLDASWYMPDEQRNPLQEYQVAHIPGALFFDVDGISDRTTNLPHMLPSDEAFAAAVSALGIENKDGVVVYDDGGLPRWRASGFDVESSASSDAILKASAASEAIEKVYHGQAVGPVTFLTKYQPHLVWTLEQVKKNTEEQTHQHIDARSKARFDGVAAEPRKGIRSGHVPGSKCVPFPQMLDASQTLLSADQLTKKFEQEGISLDNPVITSCGTGVTACILALGLHRLGKTNVPVYDGSWTEWGAQEDTPVSTSTSTS | 354 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ccar2g02313 | 354 | ProSitePatterns | Rhodanese C-terminal signature. | 329 | 339 | IPR001307 | GO:0004792(InterPro) | |
| Ccar2g02313 | 354 | CDD | TST-Repeat-1 | 80 | 170 | - | - | |
| Ccar2g02313 | 354 | Pfam | Rhodanese-like domain | 225 | 341 | IPR001763 | - | |
| Ccar2g02313 | 354 | Pfam | Rhodanese-like domain | 82 | 172 | IPR001763 | - | |
| Ccar2g02313 | 354 | FunFam | Sulfurtransferase | 219 | 350 | - | - | |
| Ccar2g02313 | 354 | SUPERFAMILY | Rhodanese-Cell cycle control phosphatase | 227 | 350 | IPR036873 | - | |
| Ccar2g02313 | 354 | PANTHER | THIOSULFATE SULFERTANSFERASE | 168 | 352 | IPR045078 | GO:0004792(PANTHER)|GO:0005739(PANTHER)|GO:0016783(InterPro) | |
| Ccar2g02313 | 354 | SMART | rhod-4 | 81 | 211 | IPR001763 | - | |
| Ccar2g02313 | 354 | SMART | rhod-4 | 224 | 345 | IPR001763 | - | |
| Ccar2g02313 | 354 | Gene3D | - | 72 | 170 | IPR036873 | - | |
| Ccar2g02313 | 354 | Gene3D | - | 219 | 352 | IPR036873 | - | |
| Ccar2g02313 | 354 | ProSitePatterns | Rhodanese signature 1. | 115 | 126 | IPR001307 | GO:0004792(InterPro) | |
| Ccar2g02313 | 354 | ProSiteProfiles | Rhodanese domain profile. | 234 | 348 | IPR001763 | - | |
| Ccar2g02313 | 354 | SUPERFAMILY | Rhodanese-Cell cycle control phosphatase | 77 | 185 | IPR036873 | - | |
| Ccar2g02313 | 354 | ProSiteProfiles | Rhodanese domain profile. | 91 | 177 | IPR001763 | - | |
| Ccar2g02313 | 354 | CDD | TST-Repeat-2 | 225 | 341 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ccar2g02313 | K01011 | thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ccar | Ccar-Chr2:53235378 | Ccar2g02313 | Ccar-Chr2:70299182 | dispersed |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Ccar11g00653 | . | 17 | 145 | Sulfurtransferasese/Rhodanese gene family | AT5G03455 | 64.341 | 1.61e-59 | 178.0 | |
| Ccar11g00049 | . | 147 | 323 | Sulfurtransferasese/Rhodanese gene family | AT5G23060 | 28.492 | 1.12e-10 | 62.0 | |
| Ccar16g00904 | . | 11 | 456 | Sulfurtransferasese/Rhodanese gene family | AT4G01050 | 53.275 | 2.58e-132 | 401.0 | |
| Ccar16g00366 | . | 10 | 116 | Sulfurtransferasese/Rhodanese gene family | AT5G66040 | 56.075 | 1.48e-39 | 127.0 | |
| Ccar9g00881 | . | 82 | 234 | Sulfurtransferasese/Rhodanese gene family | AT4G01050 | 36.601 | 1.79e-16 | 77.8 | |
| Ccar9g00348 | . | 1 | 182 | Sulfurtransferasese/Rhodanese gene family | AT2G42220 | 63.736 | 5.39e-83 | 244.0 | |
| Ccar4g00673 | . | 1 | 253 | Sulfurtransferasese/Rhodanese gene family | AT4G24750 | 41.538 | 1.37e-48 | 161.0 | |
| Ccar4g00326 | . | 123 | 179 | Sulfurtransferasese/Rhodanese gene family | AT5G19370 | 41.935 | 6.13e-08 | 47.8 | |
| Ccar6g00741 | . | 72 | 237 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 25.543 | 3.05e-11 | 62.8 | |
| Ccar10g00305 | . | 1 | 464 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 70.172 | 0.0 | 668.0 | |
| Ccar5g01067 | . | 45 | 159 | Sulfurtransferasese/Rhodanese gene family | AT4G35770 | 60.0 | 9.28e-43 | 142.0 | |
| Ccar5g00937 | . | 49 | 216 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 30.233 | 1.15e-11 | 65.1 | |
| Ccar5g00739 | . | 7 | 146 | Sulfurtransferasese/Rhodanese gene family | AT3G08920 | 53.741 | 3.06e-50 | 158.0 | |
| Ccar13g01182 | . | 1 | 222 | Sulfurtransferasese/Rhodanese gene family | AT4G27700 | 57.664 | 9.03e-97 | 286.0 | |
| Ccar3g01152 | . | 34 | 383 | Sulfurtransferasese/Rhodanese gene family | AT5G23060 | 63.714 | 2.25e-152 | 433.0 | |
| Ccar3g00564 | . | 82 | 461 | Sulfurtransferasese/Rhodanese gene family | AT2G40760 | 74.474 | 0.0 | 578.0 | |
| Ccar3g00149 | . | 72 | 438 | Sulfurtransferasese/Rhodanese gene family | AT1G17850 | 56.763 | 1.07e-167 | 478.0 | |
| Ccar1g01455 | . | 4 | 144 | Sulfurtransferasese/Rhodanese gene family | AT2G17850 | 48.592 | 2.13e-43 | 141.0 | |
| Ccar2g02313 | . | 1 | 379 | Sulfurtransferasese/Rhodanese gene family | AT1G79230 | 65.354 | 0.0 | 505.0 | |
| Ccar2g01607 | . | 11 | 581 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 65.05 | 0.0 | 794.0 | |
| Ccar2g01388 | . | 1 | 253 | Sulfurtransferasese/Rhodanese gene family | AT1G79230 | 55.686 | 1.50e-82 | 248.0 |