AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g02321 ATGGCTTTTACTGTAATCCCCAATCTCTCTCCTCCATCTTTTACTCGACTTCATCTTCATCATCAATCCTATTCCTTCCATAAATCTTCATCTAATTCTGCAATTCACCATAACCACCACCATTCCTCCCACCTCCCTCTACAATCATCCGTTGAATTACCACCGGTTCGTGTTCGTGTTTCTCCGCCGCGAGATCCTCGCCAGGATTTCTACGTTAATCTCGGTTTAGCTTTCACCGGTATACACAACTACAAACTCATCTTCAGTGCATTACGTTTCCATGGTCGTATCCTTTTCAAAGAAATCTCCCTAGAGATTTTTCGGGTTTGGCAGCCATCAGAGAACCTAATATTAATCCGTTGGAACCTCAAAGGCATCCCTCGTGTACCCTGGGAAGCCAAGGGTGAATTCCAGGGCACTTCTCGCTACAAATTGGATCGAAATGGGAAAATTTACGAACATAAAGTCGATAATTTGGCTTTCAATCTTCCACAACAACTAAAACCTGCTATATCTGTTTTGGATTTGGTGTCTGCTTGTCCTGCTACCCCTAACCCTACATTCTCTTGGGGAATCGTGGATTCTACTACCTATTCGTCTTCGTGGCTAGACTTCTATCGGGCAGTTAAGAACACGTTGGATCCTAGCCAAGATTCTTCAGTTACCTTTGGATGCCAGAAATCCTCATACTTTGATGCTAGCAATAGTGCGGATTTTCGACGACCAGATTTCCTTTTGGCAGCGACGTTTGATGTACTCGCGTCTAAGTTGCTGTTGCAAGCAGATGGAACACCTTCTGCAGGTTTCTCACAAGTTACAGCTTCAGTATGTTTAGAAAACGACGACCTTGATGCCACCTCCTTCCTCCTAGATGAAACAGAAGCTGCGAATGTTGATTTGCTAGAAACAGAGTCTACTCAGAGCCAGTAA 930 44.09 MAFTVIPNLSPPSFTRLHLHHQSYSFHKSSSNSAIHHNHHHSSHLPLQSSVELPPVRVRVSPPRDPRQDFYVNLGLAFTGIHNYKLIFSALRFHGRILFKEISLEIFRVWQPSENLILIRWNLKGIPRVPWEAKGEFQGTSRYKLDRNGKIYEHKVDNLAFNLPQQLKPAISVLDLVSACPATPNPTFSWGIVDSTTYSSSWLDFYRAVKNTLDPSQDSSVTFGCQKSSYFDASNSADFRRPDFLLAATFDVLASKLLLQADGTPSAGFSQVTASVCLENDDLDATSFLLDETEAANVDLLETESTQSQ 309
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g02321 309 SUPERFAMILY NTF2-like 75 155 IPR032710 -
Ccar2g02321 309 PANTHER RIKEN CDNA 2310061I04 GENE 77 178 IPR018790 -
Ccar2g02321 309 Pfam Uncharacterized conserved protein (DUF2358) 76 154 IPR018790 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g02321 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr16:21345233 Ccar2g02321 Ccar-Chr2:70393823 dispersed