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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g02327 ATGGACGGAGGAGTAGTAGTGGTGCATCCGGCAATCGGACCTCTGGCGTATCTGCTCGGAACTTGGAGAGGTCAAGGAGAAGGCGGTTTCCCAACCATATCCTCCTTCACTTATGGTGAAGAACTCAACTTCACTCATCCCGGAAACAAGCCTGTAATCGCGTATTCTCAAAAGACTTGGAAATTGAACTCTGGAGAGCCTATGCATGCCGAGAGCGGATACTGGAGGCCAAAGCCCGATGGAACCATTGAGGTTGTCATAGCTCAAAGCACTGGTCTCGTCGAAGTTCAGAAAGGATCATATGATGCTGAAAATAAAGTGGTGAAGCTTCATAGTGAGGTTATAGGAAATGCTTCCAAGGTGAAAGAGATATCTCGGGTTTTTACTCTGGTTAACGAAGAGTTATCTTACGTAGTTGAGATGGCTACCAATCTCACCGATCGTCAACCACATCTGAAAGCATCGCTTAAGAAGCTCTAA 480 46.46 MDGGVVVVHPAIGPLAYLLGTWRGQGEGGFPTISSFTYGEELNFTHPGNKPVIAYSQKTWKLNSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGSYDAENKVVKLHSEVIGNASKVKEISRVFTLVNEELSYVVEMATNLTDRQPHLKASLKKL 159
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g02327 159 Gene3D - 7 159 IPR012674 -
Ccar2g02327 159 CDD lipocalin-heme-bd-THAP4-like 14 158 IPR014878 -
Ccar2g02327 159 Pfam THAP4-like, heme-binding beta-barrel domain 12 158 IPR014878 -
Ccar2g02327 159 SUPERFAMILY Lipocalins 8 158 IPR012674 -
Ccar2g02327 159 PANTHER THAP4 PROTEIN 8 159 IPR045165 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g02327 K23205 THAP domain-containing protein 4