Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar5g01577	ATGGTTAAAATTGGAATCAACGGATTTGGAAGAATCGGCCGATTGGTGGCGAGAGCTGCTCTACAGACCGATGATATTGAACTTGTCGCCGTTAATGATCCTTTTATTACTACCGATTACATGATCTACATGTTCAAATACGATAGTGTTCATGGCCAATGGAAAAAACATGATATCAAAGTCAAGGATTCGAACACTCTTCTCTTTGGCGATAAGCCTGTTAGAGTTTTTGGCATGAAAAACCCAGAGGAGATCCCATGGGGTGAGGCTGGAGCTGAATTTGTTGTGGAGTCCACTGGAGTTTTTACCGATAAGGACAAGGCTGCTGCCCATTTGAAGGCTGTTGGAAAGGTTCTGCCTGCACTTAATGGCAAACTTACAGGGATGGCTTTCCGTGTTCCTACCGTTGACGTCTCGGTGGTTGACCTTACTGCCAGGCTTGAGAAGGGTGCGTCCTATGATGACATCAAGGCTGCTATCAAATCTAGCATATTCGATGCCAAGGCTGGTATCGCTCTGAACAACAACTTTGTGAAGCTTGTTTCTTGGTATGACAACGAATGGGGATATAGGATGATTCAGCTCTCCATCGTTGTTGAGGTGTTTTAG	609	44.83	MVKIGINGFGRIGRLVARAALQTDDIELVAVNDPFITTDYMIYMFKYDSVHGQWKKHDIKVKDSNTLLFGDKPVRVFGMKNPEEIPWGEAGAEFVVESTGVFTDKDKAAAHLKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTARLEKGASYDDIKAAIKSSIFDAKAGIALNNNFVKLVSWYDNEWGYRMIQLSIVVEVF	202

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar5g01577	202	Pfam	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain	2	105	IPR020828	GO:0051287(InterPro)
	Ccar5g01577	202	PANTHER	GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE	113	161	IPR020831	GO:0004365(PANTHER)\|GO:0005829(PANTHER)\|GO:0006096(PANTHER)\|GO:0016620(InterPro)
	Ccar5g01577	202	SMART	gp-dh-n-7	2	127	IPR020828	GO:0051287(InterPro)
	Ccar5g01577	202	FunFam	Glyceraldehyde-3-phosphate dehydrogenase	1	123	-	-
	Ccar5g01577	202	SUPERFAMILY	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	111	185	-	-
	Ccar5g01577	202	Pfam	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain	111	162	IPR020829	GO:0016620(InterPro)
	Ccar5g01577	202	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	1	115	IPR036291	-
	Ccar5g01577	202	Gene3D	-	1	129	-	-
	Ccar5g01577	202	Gene3D	Dihydrodipicolinate Reductase; domain 2	160	186	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar5g01577	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	39604	Ccar5g01577	Ccar7g00038

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ccar	Ccar-Chr13:656910	Ccar5g01577	Ccar-Chr5:36888802	wgd
	Ccar	Ccar-Chr5:36888802	Ccar7g00038	Ccar-Chr7:255159	wgd