AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar5g01586 ATGGCAATGACCACACCTACGTACCCATTTGGGGTTAAGACCCCCTATCATTTTTCTATCAGACCTTCGCATTCCCGATCCTTTTGCTCACACCACCCGCTCAATCTTGCCTCATTCGGTGGATCCCTTCAGGCTCCAACTTCAGGCAGGAGAATAGGTCTGAGGGTTGTTTGTAATGTACAAAACCTACATGTTCTCACCAGGAATGAACCCGAAAGTCAAGCTTCACAAGGATCAATCAAACAGTTATCATGTGTGATGAAGTTTGGTGGATCATCTTTGGCCTCGGCAGAAAGGATGAAACAAGTCGCTCATCTTATCCTCAGCTTCCYACAAGAGACTCCTGTCATTGTCCTCTCTGCTATGGGCAAGACCACCAACAATCTTTTAATGGCTGGAGAGAAGGCTGCAAGTTGTGTTTCCCCTGTGTCTGAACTTGATGAATTGAGCTTTGTGAAAGAACTACACCATAGGACAGTGGATGAGCTTGGATTAGACAAAACACTCATTACAGACCACCTAGAAAAATTAGAGCGACTTCTGAACGGGATTGCAGTACTAAAAGAGTTCACGCCTCGTGCAAAAGACTACCTAGTCTCATTTGGAGAGTGCATGTCCACAAKAATATTTTCTGCATRCTTGAATAAAATCGGCGTCAAAGCGCGCCAWGTATGTGATTTTTTCATCACTTTTAATATGCTCAAAGTTTTCAAGCACTGGTGA 723 44.03 MAMTTPTYPFGVKTPYHFSIRPSHSRSFCSHHPLNLASFGGSLQAPTSGRRIGLRVVCNVQNLHVLTRNEPESQASQGSIKQLSCVMKFGGSSLASAERMKQVAHLILSFXQETPVIVLSAMGKTTNNLLMAGEKAASCVSPVSELDELSFVKELHHRTVDELGLDKTLITDHLEKLERLLNGIAVLKEFTPRAKDYLVSFGECMSTXIFSAXLNKIGVKARXVCDFFITFNMLKVFKHW 240
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar5g01586 240 Gene3D - 83 232 IPR036393 -
Ccar5g01586 240 Pfam Amino acid kinase family 85 231 IPR001048 -
Ccar5g01586 240 SUPERFAMILY Carbamate kinase-like 86 225 IPR036393 -
Ccar5g01586 240 PANTHER ASPARTATE KINASE 82 230 - GO:0004072(PANTHER)|GO:0005829(PANTHER)|GO:0009089(PANTHER)|GO:0009090(PANTHER)|GO:0009570(PANTHER)
Ccar5g01586 240 ProSitePatterns Aspartokinase signature. 86 94 IPR018042 GO:0004072(InterPro)|GO:0008652(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar5g01586 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
38308 Ccar1g00966 Ccar5g01586
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr5:36975490 Ccar8g00017 Ccar-Chr8:461226 dispersed
Ccar Ccar-Chr1:11219986 Ccar5g01586 Ccar-Chr5:36975490 wgd