Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ccar5g01589 | ATGAATCCACAACCTCCTCCTTCTTCCTCCGATCAGCCGCCCAATTATCCGGGCACTCACGTCATGGGAACACCTATGCCGCCTTCCAACCCCTACGTTCAATATGGCGCTCCTCCACCTCCACCTCCACCTCCCAACAACAACCACAACCTGGATAATGTTCGTAAGAAGCTTAATACATGGGGCAACAAGGCAGAGACCACCGCTACAAACATCTGGACCAATCTGAAAACGGGTCCATCTGTGACTGGATCGGCATGGGGGAAAATGAATTTGACGGCAAAAGCATTAACCGAAGGTGGATTCGAATCTCTATACCGGCAGAACTTCACGGTTTACCCCAACGAGAAACTGAACAGGACTTTTGCCTGTTACTTGTCTACATCCACCGGACCTGTCGCCGGAACCCTGTACCTCTCCAATATTCATGTCGCCTTCTGTAGCGATCGTCCCTTGTCTTCCATCCAACCCAACGGCATGGAGTCTTGGATCTATTACAAAGTCATCGTCCCATTGGAGAAGATAGCCACGGTGAACCCAGTTACGGTGACAGGTAAAAAACAAATAGACAAATATATTCAGATCTCCACAATTGATTCTCAAGATTTCTGGTTCATGGGTTTTGTCAACCACGAGAAAGCGTCAAAACATCTCCTCAACGGTGTCTCCACCGCCCCACGATTTCCTTAA | 690 | 48.7 | MNPQPPPSSSDQPPNYPGTHVMGTPMPPSNPYVQYGAPPPPPPPPNNNHNLDNVRKKLNTWGNKAETTATNIWTNLKTGPSVTGSAWGKMNLTAKALTEGGFESLYRQNFTVYPNEKLNRTFACYLSTSTGPVAGTLYLSNIHVAFCSDRPLSSIQPNGMESWIYYKVIVPLEKIATVNPVTVTGKKQIDKYIQISTIDSQDFWFMGFVNHEKASKHLLNGVSTAPRFP | 229 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ccar5g01589 | 229 | Gene3D | - | 102 | 223 | IPR011993 | - | |
| Ccar5g01589 | 229 | PANTHER | GEM-LIKE PROTEIN 2 | 19 | 223 | IPR037848 | - | |
| Ccar5g01589 | 229 | Pfam | GRAM domain | 106 | 218 | IPR004182 | - | |
| Ccar5g01589 | 229 | SMART | gram2001c | 104 | 182 | IPR004182 | - | |
| Ccar5g01589 | 229 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
| Ccar5g01589 | 229 | MobiDBLite | consensus disorder prediction | 31 | 48 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ccar5g01589 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ccar | Ccar-Chr3:17832764 | Ccar5g01589 | Ccar-Chr5:36982762 | dispersed | |
| Ccar | Ccar-Chr15:13332177 | Ccar5g01589 | Ccar-Chr5:36982762 | wgd |