Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar5g01597	ATGGGCAGTACGTTTAATCCACAAATTTTGGTGGAGAAGCTGGCCAAGCTCAATAGTTCACAGCAGAGCATTGAGACCTTGTCACACTGGTGTATTTTTCATATGAACAAGGCAAAACAAGTTGTTGAAACATGGGCTAGGCAATTCCGCTGTTCCCCACGTGATCAGCGTCTAGCTTTTCTCTATCTTGCAAATGATATACTGCAGAATAGTAGGCGAAAGGGTTCAGAGTTTGTTGGTGAATTCTGGAAGGTTCTTCCAGATGCACTCCATAATGTGATGGATAATACAGATGAATCTGGAAGGAATGCTGCATTACGCCTGGTCAGGATTTGGGAGGAAAGAAAAGTTTTTGGTTCTCGGGGGCAGATTCTTAAGGAAGAACTTGCCGGAAGGCACCTAGAAACTAGTAACAAAAATGAGAAGCATTCAGGGTTAAAATTGCAACACTCTGCTGGAAATGCATTGGACAAGATAGTTTCAGGATATCAAATTATTTATGGTGGTCAACTAGATGAAGATGCTATGATCAGCAAATGCAAAAACACTATTAGCTGTATTGAAAAAGTGGAGAAGGAAATTGGTGGTGATTTGAGATCTGCACAAGTGAATGTGGAAGACTTCAAGGGACATCATTCTACATTGAGGGATTTTATTGAGCAACTTTCAGCTGTGGAGTCATCAAGAATTAATCTTATTTGTCATCTGCGGGAGGCTCTTCAAGAACAGGAAATGAAGCTGGATCAAGTCCGTAATGAACTTAAGGCTGCACATACCCAATCAGAAAAGGCGGATAATTTGTGCAGGCAATTGCTAAATCCTGGTGTTACCAAGTTACTCCCTGAGCAGGGTACAAACACCTCCAAAGTGCTGCCCAATTACGGAGAACAATCAGCACCAGTAATGTACACACGACAAATTCCTGTATCTGAGCAATCCGAGGAGAATACTAAATCTGCAGCAGCTGCAGTGGCTGCAAAGCTCACTGCATCAACCTCTTCAGCTGAGATGCTGTCATTTGTTCTCTCTTCCTTGGCATCCGAGGGTGTGATAAGTAGTAATTCAGTGAAAGAGAAGGAATATCCTCCTGAAAAGAGAGCCAAGATTGATCAGAATGATGTGAAAGTTCCCCCGGTGGCTGAGCAACAACCACCTCTACCATCATGTCCGCCACCGTTGCCGCCAATGCCCCCCATGGTGCCATTGTATCCGGTGCCACCATTCATGCAGACGGCTGGGTCAGTAGCATATGGGTATAACACAAACCAACAAGCACCAAGGGCCTTGCCAGGGTATCCGAGTGTGGGAGCACCGGTAATCAACAGTGGGTCTTCATACACATGTCCACCTCCACCAAAGGGGTACCAGAATTATCAAATAGAAGGTGGGTTCTGTAGCCAGCCAACGACACCAATTTCCAGACAGTAG	1428	44.75	MGSTFNPQILVEKLAKLNSSQQSIETLSHWCIFHMNKAKQVVETWARQFRCSPRDQRLAFLYLANDILQNSRRKGSEFVGEFWKVLPDALHNVMDNTDESGRNAALRLVRIWEERKVFGSRGQILKEELAGRHLETSNKNEKHSGLKLQHSAGNALDKIVSGYQIIYGGQLDEDAMISKCKNTISCIEKVEKEIGGDLRSAQVNVEDFKGHHSTLRDFIEQLSAVESSRINLICHLREALQEQEMKLDQVRNELKAAHTQSEKADNLCRQLLNPGVTKLLPEQGTNTSKVLPNYGEQSAPVMYTRQIPVSEQSEENTKSAAAAVAAKLTASTSSAEMLSFVLSSLASEGVISSNSVKEKEYPPEKRAKIDQNDVKVPPVAEQQPPLPSCPPPLPPMPPMVPLYPVPPFMQTAGSVAYGYNTNQQAPRALPGYPSVGAPVINSGSSYTCPPPPKGYQNYQIEGGFCSQPTTPISRQ	475

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar5g01597	475	ProSiteProfiles	CID domain profile.	2	134	IPR006569	-
	Ccar5g01597	475	Coils	Coil	237	267	-	-
	Ccar5g01597	475	SMART	558neu5	9	130	IPR006569	-
	Ccar5g01597	475	CDD	CID-RPRD-like	7	129	-	-
	Ccar5g01597	475	PANTHER	CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN	3	438	-	GO:0000993(PANTHER)\|GO:0031124(PANTHER)
	Ccar5g01597	475	FunFam	ENTH-VHS family protein isoform 1	2	130	-	-
	Ccar5g01597	475	Gene3D	-	2	131	IPR008942	-
	Ccar5g01597	475	SUPERFAMILY	ENTH-VHS domain	11	117	IPR008942	-
	Ccar5g01597	475	Pfam	CID domain	9	120	IPR006569	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar5g01597	K15559	regulator of Ty1 transposition protein 103

Event-related genes

Select	Gene_1	Gene_2	Event_name
	38310	Ccar1g00979	Ccar5g01597

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ccar	Ccar-Chr5:37023373	Ccar9g00378	Ccar-Chr9:10135507	dispersed
	Ccar	Ccar-Chr1:11355409	Ccar5g01597	Ccar-Chr5:37023373	wgd