AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar5g01613 ACTCACCGTCTCACGGCTGTGGAGGAGACACACCACCACTCATCGGAGCCAGACAGTCATCAATCAACCATCGTCATTAACCTAATCAGCAACTTCAGATTCTTCATCTCTTTGATGGCAGTTCCCTCATCCAATTTGACTGCTAAATCTTCACCCCTTTGTTTCGGGTTTCATGTCGCCGGGAACAAGCCTTTTCTTCCGTCGTCTTATGCTAAGTTTGGATCACTGAAGAAGAATCGAGATGGAGGAATTCAGATTACTGTTTGTAAAGCAGCTTCTCCTTCTTCCTCCTCCTTGTCCTTTCGTTATCTCGATGCCGATGATTTTAGACATCCGCTCGACAAGCAGAATACGCTGCTTTTGAGGGCAATTCCGGGTCTGAACGAAATTGGGAAAGCTTTATTAGGGAGCATAGCAGAACAGGTCCTGGTACTTGAAAATATAGGGACCTCCGTTCTTGTATCTGAAAATCAGCTTTCAGAACTTCATCAGTTAATGGTTCAATCAGCTGAAGCACTGAAAATTGAAGCTCCTGATCTGTATGTGCGGCAAAGTCCATCACCTAATGCATATACTCTAGCCATCAATGGTAAAAAGCCGTTTGTTGTTGTTCACACAAGCCTTATAGAGCTTCTTTCAAGAAAGGAGTTGCAGGCTGTTTTGGCTCATGAGCTAGGACACCTTAAATGCGATCACGGTGTATGGCTGACAGTCGCAAATTTTCTTACCCTCGGAGCCAACACAATACCTGGGGTTGGTGGGATGATAGCCCAGAGATTAGAAGAACAACTATTTCGTTGGCTCCGGGCTGCAGAGCTTACCTGTGATCGTGCCGCTCTTCTTGTTGTTCAAGATCCCAAGGTGGTCATTTCTGTTCTAATGAAACTGGCTGGAGGATGCCCATCGTTGGCTGATCAACTTAACGTGGATGCTTTCCTAGAGCAAGCCCGATCTTATGACAAAGCATCCGCAAGTCCAGTAGGATGGTATATAAGGTAA 999 45.55 THRLTAVEETHHHSSEPDSHQSTIVINLISNFRFFISLMAVPSSNLTAKSSPLCFGFHVAGNKPFLPSSYAKFGSLKKNRDGGIQITVCKAASPSSSSLSFRYLDADDFRHPLDKQNTLLLRAIPGLNEIGKALLGSIAEQVLVLENIGTSVLVSENQLSELHQLMVQSAEALKIEAPDLYVRQSPSPNAYTLAINGKKPFVVVHTSLIELLSRKELQAVLAHELGHLKCDHGVWLTVANFLTLGANTIPGVGGMIAQRLEEQLFRWLRAAELTCDRAALLVVQDPKVVISVLMKLAGGCPSLADQLNVDAFLEQARSYDKASASPVGWYIR 332
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar5g01613 332 Gene3D Metalloproteases (zincins), catalytic domain 153 240 - -
Ccar5g01613 332 Pfam Peptidase family M48 160 297 IPR001915 GO:0004222(InterPro)|GO:0006508(InterPro)
Ccar5g01613 332 CDD M48-Ste24p-like 148 320 - -
Ccar5g01613 332 FunFam Peptidase M48 family protein 152 240 - -
Ccar5g01613 332 PANTHER CAAX PRENYL PROTEASE 1 93 321 - GO:0004222(PANTHER)|GO:0030176(PANTHER)|GO:0071586(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar5g01613 - -