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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar5g01617 ATGGGTGCTTGTGTGTCGATTCATCATAAGGCTTCTGCAATGAAGGTGCAAGTGTCGTTTGATTCTTCAAAACCAGATCATAAGTTAGTGATTCAATCTTCCCCAATGAGCGGTAAACTTCCGATGGTGAATGGCCATGTTGCTGTTAAACCTCAGTTGCCCCCATCTCAGTCGCCGCCTGCTTTCTCCGATTATGGCAGTAAAGAGGAGACCTTCTTTGACTCCCAAGCATGGTTAGATTCAGATTATGAAGATGACTTTATGAGTGTTAATGGTGAATTTACCCCATCGAGAGGCAATACGCCGGTACACCATAGCTTAACCGTAGGAACCCCACAATCTAACGGAAGAGCCATAGCCATCCCCCCGGACAACAACTTAGTTCATGGTTCAACACTTGAGCCATCTCCATCTCCAACTCCAACCGAAAAAAAGATGAGACTTTTGGACCTTTTTAAAGAAAGCCTAAGAGAAAAGGTTGAGGAAATCGATGAACCACCCAAGAAAGATGGTGAAATGGGGTTGAACAAAGATGGTTTGAAGCCGAAAAGGGGGACTTCTATGCAGGGTTGCTTTTCTACTTTGCTTTCTGTCCGTAGCGTGGGAAGGCAAAAGAAGGGTTGTCGGGTTATAAATTAG 639 44.76 MGACVSIHHKASAMKVQVSFDSSKPDHKLVIQSSPMSGKLPMVNGHVAVKPQLPPSQSPPAFSDYGSKEETFFDSQAWLDSDYEDDFMSVNGEFTPSRGNTPVHHSLTVGTPQSNGRAIAIPPDNNLVHGSTLEPSPSPTPTEKKMRLLDLFKESLREKVEEIDEPPKKDGEMGLNKDGLKPKRGTSMQGCFSTLLSVRSVGRQKKGCRVIN 212
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar5g01617 212 MobiDBLite consensus disorder prediction 160 188 - -
Ccar5g01617 212 MobiDBLite consensus disorder prediction 160 179 - -
Ccar5g01617 212 PANTHER OS01G0920100 PROTEIN 1 206 IPR038947 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar5g01617 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
39613 Ccar5g01617 Ccar7g00017
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr1:11619860 Ccar5g01617 Ccar-Chr5:37142284 wgd
Ccar Ccar-Chr5:37142284 Ccar7g00017 Ccar-Chr7:159781 wgd