AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g01372 ATGGCTTCTTTTGCCACTCCTACTACCTTCACCGGCATCCCGGCCACCACGGCTGCCGGCAACACCACCAAAAGGCTGCCGAACTCGCCTTTCTTTTCGACCTCCTACCAACGTTCCAAACGAAGTACCTATCGCAGCTTCAAAGTCTCGTGCAATGTCACCGATGGCAACGAGAAGCGACCCGAATCCGAAAAGCCTACGTTGCTCAACGTCGGCAATCTCGACCGAAGAAACTTGCTCCTAGGCCTCGGCGCGGGTGCCGGCCTTTACGGCACGGTCAACTTACCTTCGGCCTTCGCTGCCCCTATCACGACGCCCGATATCACGACGTGCAAGGCCTCGACCGACGGTTTCTTTAACCTAAAAGACCGCATAAGGACCAACGCATGCTGTCCTCCCGCGTCCGTAAAACCCGTAAAAAAATACGTGCTACCAAAAGACGAAGCGGTCCGGATTAGACCGGCCGCACATAGAGTCACTCCCGAGTACGTGGCGAAGTACCAGAAGGCAATGGCGGCCATGAGGGCTCTCCCAGACGACGACCCACACAGCTTCGTGCAACAAGCGAAGATCCATTGTGCGTATTGCAACGGCGGATACTTTCAAGAAGGTTTCCCCAGCAAGGAACTTCAGGTTCACAACTGCTGGCTCTTCTTTCCGTTCCATCGTTGGTACCTCTATTTCTTCGAGAGAATACTCGGAAAATTGATCGACGATCCGACTTTCGCCTTACCCTATTGGAATTGGGACAATCCCACGGGGATGAGTATTCCCGCGTTCTTCGAAGGGAAAAACTTTCCCGACGATAAATCAAAAGTGTTAAACGCGGCCTTTGACGCGTTTCGGAACGTGGAGCATCTCCCGCCAGCCATCCTCAACATCGACGTCGTCAATAACTCCACCACCGATTACACTTGCGTACAACAAATAGGCGTAAACCTGAGCTTAATGTATAAGCAGATGATCACCAACTCCCCTAACGCGGCCACCTTCTTCGGTGGGGAGTACAAAGCCGGGGATGATCCGATTTCTCTACAGAATTCGAAAGGGCCAATCGAGTCCGGTGTCCACACCGCGGCCCACATATGGGTGGGTAACCCTAGGATGCCGAATAACGAGGACATGGGGAACTTCTACTCGTCGGGATGGGACCCGTTGTTCTACACCCACCATGCCAATGTCGACCGTATGTGGAAAATATGGAAAGACCTAAAGGGGCCCGAATACCCCGATCACACCGACCCCACGGACCCCGATTGGCTGAACGCATCGTACGTGTTCTACGACGAGAACAGAGAGCTCGTACGTGTCTACAACAAAGATTGTGTGCAAATGGAGAATCTACGTTACGAATACGAACCTTCCCCGCTCCCCTGGCTTAATAGCCGATCGGTTGCACGTAACAAGAAGGCGAACGTTGCGGGTAAGTCATCCGGAAAGGTGAAGAAGGTCGAGGAGACGAAGTTTCCGGTGAAACTAGACAAGATAGTGAAGGTGTTGGTGAAGAGGCCAGCTACAAATAGAACCAAAGAGGATAAAAAGAAGGCTTATGAGATATTGTACATTAATGATATAAGGCTGGATGGTGAGAAGTTTGTGAAGTTTGATGTGTTTGTAGATGACCTAGACGAAGATGGTAGCGCTTGCAGTCCACTAGACAGCGAGTTTGCGGGTAGTTTCTCGCAATTGGCGCATTTTCGTGGGCACAACATGTTGATGAGTAGTGGGGCAACGTTCGGGTTGAATGAGTTGTTGGACGAGGTGCAAGCCGAGGATGAAGAGTATATTTTGGTGACGTTGGTGCCTAGGGAAGGGTGTCAGGATGTCACCGTTGGTGCGATCAAGGTTGGGTTGGTTCCGCTCGATGGCGAGAAGTTTGTGAAGTTTGATGTCTTTGTAGATGACCTAGACGATGATGGTAGCGCTTGCAGTCCACTAGACAGTGAGTTTGCGGGTAGTTTCTCGCAATTGGGGCATTTTCGTGGGCACAACATGTTGATGAGTAGTGGGGCAACGTTCGGGTTGAACGAGTTGTTGGACGACGTGCAAGCCGAGGATGACGAGTATATTTTGGTGACATTGGTGCCTAGGGAAGGGTGCAAGGATGTCACGGTTGGTGTGATCAAAGTTGGGTTGGTTCCGTCAATTGCTTATGGATGA 2160 51.44 MASFATPTTFTGIPATTAAGNTTKRLPNSPFFSTSYQRSKRSTYRSFKVSCNVTDGNEKRPESEKPTLLNVGNLDRRNLLLGLGAGAGLYGTVNLPSAFAAPITTPDITTCKASTDGFFNLKDRIRTNACCPPASVKPVKKYVLPKDEAVRIRPAAHRVTPEYVAKYQKAMAAMRALPDDDPHSFVQQAKIHCAYCNGGYFQEGFPSKELQVHNCWLFFPFHRWYLYFFERILGKLIDDPTFALPYWNWDNPTGMSIPAFFEGKNFPDDKSKVLNAAFDAFRNVEHLPPAILNIDVVNNSTTDYTCVQQIGVNLSLMYKQMITNSPNAATFFGGEYKAGDDPISLQNSKGPIESGVHTAAHIWVGNPRMPNNEDMGNFYSSGWDPLFYTHHANVDRMWKIWKDLKGPEYPDHTDPTDPDWLNASYVFYDENRELVRVYNKDCVQMENLRYEYEPSPLPWLNSRSVARNKKANVAGKSSGKVKKVEETKFPVKLDKIVKVLVKRPATNRTKEDKKKAYEILYINDIRLDGEKFVKFDVFVDDLDEDGSACSPLDSEFAGSFSQLAHFRGHNMLMSSGATFGLNELLDEVQAEDEEYILVTLVPREGCQDVTVGAIKVGLVPLDGEKFVKFDVFVDDLDDDGSACSPLDSEFAGSFSQLGHFRGHNMLMSSGATFGLNELLDDVQAEDDEYILVTLVPREGCKDVTVGVIKVGLVPSIAYG 719
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g01372 719 SUPERFAMILY Di-copper centre-containing domain 124 459 IPR008922 -
Ceso2g01372 719 PRINTS Tyrosinase copper-binding domain signature 244 249 IPR002227 GO:0016491(InterPro)
Ceso2g01372 719 PRINTS Tyrosinase copper-binding domain signature 356 367 IPR002227 GO:0016491(InterPro)
Ceso2g01372 719 PRINTS Tyrosinase copper-binding domain signature 213 230 IPR002227 GO:0016491(InterPro)
Ceso2g01372 719 PRINTS Tyrosinase copper-binding domain signature 383 401 IPR002227 GO:0016491(InterPro)
Ceso2g01372 719 Pfam Polyphenol oxidase middle domain 414 463 IPR022739 GO:0004097(InterPro)
Ceso2g01372 719 Gene3D - 101 464 IPR008922 -
Ceso2g01372 719 ProSitePatterns Tyrosinase CuA-binding region signature. 213 230 IPR002227 GO:0016491(InterPro)
Ceso2g01372 719 MobiDBLite consensus disorder prediction 13 34 - -
Ceso2g01372 719 Pfam Protein of unknown function (DUF-B2219) 489 617 IPR022740 GO:0004097(InterPro)
Ceso2g01372 719 Pfam Protein of unknown function (DUF-B2219) 621 711 IPR022740 GO:0004097(InterPro)
Ceso2g01372 719 PANTHER TYROSINASE FAMILY MEMBER 75 566 IPR050316 -
Ceso2g01372 719 Pfam Common central domain of tyrosinase 183 403 IPR002227 GO:0016491(InterPro)
Ceso2g01372 719 ProSitePatterns Tyrosinase and hemocyanins CuB-binding region signature. 384 395 IPR002227 GO:0016491(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g01372 K00422 polyphenol oxidase [EC:1.10.3.1]
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Event-related genes

Select Gene_1 Gene_2 Event_name
40241 Ceso2g01372 Ceso4g01594
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:27914846 Ceso4g01594 Ceso-Chr4:28214982 dispersed
Ceso Ceso-Chr2:27752357 Ceso2g01372 Ceso-Chr2:27914846 proximal