Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g01372 | ATGGCTTCTTTTGCCACTCCTACTACCTTCACCGGCATCCCGGCCACCACGGCTGCCGGCAACACCACCAAAAGGCTGCCGAACTCGCCTTTCTTTTCGACCTCCTACCAACGTTCCAAACGAAGTACCTATCGCAGCTTCAAAGTCTCGTGCAATGTCACCGATGGCAACGAGAAGCGACCCGAATCCGAAAAGCCTACGTTGCTCAACGTCGGCAATCTCGACCGAAGAAACTTGCTCCTAGGCCTCGGCGCGGGTGCCGGCCTTTACGGCACGGTCAACTTACCTTCGGCCTTCGCTGCCCCTATCACGACGCCCGATATCACGACGTGCAAGGCCTCGACCGACGGTTTCTTTAACCTAAAAGACCGCATAAGGACCAACGCATGCTGTCCTCCCGCGTCCGTAAAACCCGTAAAAAAATACGTGCTACCAAAAGACGAAGCGGTCCGGATTAGACCGGCCGCACATAGAGTCACTCCCGAGTACGTGGCGAAGTACCAGAAGGCAATGGCGGCCATGAGGGCTCTCCCAGACGACGACCCACACAGCTTCGTGCAACAAGCGAAGATCCATTGTGCGTATTGCAACGGCGGATACTTTCAAGAAGGTTTCCCCAGCAAGGAACTTCAGGTTCACAACTGCTGGCTCTTCTTTCCGTTCCATCGTTGGTACCTCTATTTCTTCGAGAGAATACTCGGAAAATTGATCGACGATCCGACTTTCGCCTTACCCTATTGGAATTGGGACAATCCCACGGGGATGAGTATTCCCGCGTTCTTCGAAGGGAAAAACTTTCCCGACGATAAATCAAAAGTGTTAAACGCGGCCTTTGACGCGTTTCGGAACGTGGAGCATCTCCCGCCAGCCATCCTCAACATCGACGTCGTCAATAACTCCACCACCGATTACACTTGCGTACAACAAATAGGCGTAAACCTGAGCTTAATGTATAAGCAGATGATCACCAACTCCCCTAACGCGGCCACCTTCTTCGGTGGGGAGTACAAAGCCGGGGATGATCCGATTTCTCTACAGAATTCGAAAGGGCCAATCGAGTCCGGTGTCCACACCGCGGCCCACATATGGGTGGGTAACCCTAGGATGCCGAATAACGAGGACATGGGGAACTTCTACTCGTCGGGATGGGACCCGTTGTTCTACACCCACCATGCCAATGTCGACCGTATGTGGAAAATATGGAAAGACCTAAAGGGGCCCGAATACCCCGATCACACCGACCCCACGGACCCCGATTGGCTGAACGCATCGTACGTGTTCTACGACGAGAACAGAGAGCTCGTACGTGTCTACAACAAAGATTGTGTGCAAATGGAGAATCTACGTTACGAATACGAACCTTCCCCGCTCCCCTGGCTTAATAGCCGATCGGTTGCACGTAACAAGAAGGCGAACGTTGCGGGTAAGTCATCCGGAAAGGTGAAGAAGGTCGAGGAGACGAAGTTTCCGGTGAAACTAGACAAGATAGTGAAGGTGTTGGTGAAGAGGCCAGCTACAAATAGAACCAAAGAGGATAAAAAGAAGGCTTATGAGATATTGTACATTAATGATATAAGGCTGGATGGTGAGAAGTTTGTGAAGTTTGATGTGTTTGTAGATGACCTAGACGAAGATGGTAGCGCTTGCAGTCCACTAGACAGCGAGTTTGCGGGTAGTTTCTCGCAATTGGCGCATTTTCGTGGGCACAACATGTTGATGAGTAGTGGGGCAACGTTCGGGTTGAATGAGTTGTTGGACGAGGTGCAAGCCGAGGATGAAGAGTATATTTTGGTGACGTTGGTGCCTAGGGAAGGGTGTCAGGATGTCACCGTTGGTGCGATCAAGGTTGGGTTGGTTCCGCTCGATGGCGAGAAGTTTGTGAAGTTTGATGTCTTTGTAGATGACCTAGACGATGATGGTAGCGCTTGCAGTCCACTAGACAGTGAGTTTGCGGGTAGTTTCTCGCAATTGGGGCATTTTCGTGGGCACAACATGTTGATGAGTAGTGGGGCAACGTTCGGGTTGAACGAGTTGTTGGACGACGTGCAAGCCGAGGATGACGAGTATATTTTGGTGACATTGGTGCCTAGGGAAGGGTGCAAGGATGTCACGGTTGGTGTGATCAAAGTTGGGTTGGTTCCGTCAATTGCTTATGGATGA | 2160 | 51.44 | MASFATPTTFTGIPATTAAGNTTKRLPNSPFFSTSYQRSKRSTYRSFKVSCNVTDGNEKRPESEKPTLLNVGNLDRRNLLLGLGAGAGLYGTVNLPSAFAAPITTPDITTCKASTDGFFNLKDRIRTNACCPPASVKPVKKYVLPKDEAVRIRPAAHRVTPEYVAKYQKAMAAMRALPDDDPHSFVQQAKIHCAYCNGGYFQEGFPSKELQVHNCWLFFPFHRWYLYFFERILGKLIDDPTFALPYWNWDNPTGMSIPAFFEGKNFPDDKSKVLNAAFDAFRNVEHLPPAILNIDVVNNSTTDYTCVQQIGVNLSLMYKQMITNSPNAATFFGGEYKAGDDPISLQNSKGPIESGVHTAAHIWVGNPRMPNNEDMGNFYSSGWDPLFYTHHANVDRMWKIWKDLKGPEYPDHTDPTDPDWLNASYVFYDENRELVRVYNKDCVQMENLRYEYEPSPLPWLNSRSVARNKKANVAGKSSGKVKKVEETKFPVKLDKIVKVLVKRPATNRTKEDKKKAYEILYINDIRLDGEKFVKFDVFVDDLDEDGSACSPLDSEFAGSFSQLAHFRGHNMLMSSGATFGLNELLDEVQAEDEEYILVTLVPREGCQDVTVGAIKVGLVPLDGEKFVKFDVFVDDLDDDGSACSPLDSEFAGSFSQLGHFRGHNMLMSSGATFGLNELLDDVQAEDDEYILVTLVPREGCKDVTVGVIKVGLVPSIAYG | 719 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g01372 | 719 | SUPERFAMILY | Di-copper centre-containing domain | 124 | 459 | IPR008922 | - | |
| Ceso2g01372 | 719 | PRINTS | Tyrosinase copper-binding domain signature | 244 | 249 | IPR002227 | GO:0016491(InterPro) | |
| Ceso2g01372 | 719 | PRINTS | Tyrosinase copper-binding domain signature | 356 | 367 | IPR002227 | GO:0016491(InterPro) | |
| Ceso2g01372 | 719 | PRINTS | Tyrosinase copper-binding domain signature | 213 | 230 | IPR002227 | GO:0016491(InterPro) | |
| Ceso2g01372 | 719 | PRINTS | Tyrosinase copper-binding domain signature | 383 | 401 | IPR002227 | GO:0016491(InterPro) | |
| Ceso2g01372 | 719 | Pfam | Polyphenol oxidase middle domain | 414 | 463 | IPR022739 | GO:0004097(InterPro) | |
| Ceso2g01372 | 719 | Gene3D | - | 101 | 464 | IPR008922 | - | |
| Ceso2g01372 | 719 | ProSitePatterns | Tyrosinase CuA-binding region signature. | 213 | 230 | IPR002227 | GO:0016491(InterPro) | |
| Ceso2g01372 | 719 | MobiDBLite | consensus disorder prediction | 13 | 34 | - | - | |
| Ceso2g01372 | 719 | Pfam | Protein of unknown function (DUF-B2219) | 489 | 617 | IPR022740 | GO:0004097(InterPro) | |
| Ceso2g01372 | 719 | Pfam | Protein of unknown function (DUF-B2219) | 621 | 711 | IPR022740 | GO:0004097(InterPro) | |
| Ceso2g01372 | 719 | PANTHER | TYROSINASE FAMILY MEMBER | 75 | 566 | IPR050316 | - | |
| Ceso2g01372 | 719 | Pfam | Common central domain of tyrosinase | 183 | 403 | IPR002227 | GO:0016491(InterPro) | |
| Ceso2g01372 | 719 | ProSitePatterns | Tyrosinase and hemocyanins CuB-binding region signature. | 384 | 395 | IPR002227 | GO:0016491(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g01372 | K00422 | polyphenol oxidase [EC:1.10.3.1] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 40241 | Ceso2g01372 | Ceso4g01594 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ceso | Ceso-Chr2:27914846 | Ceso4g01594 | Ceso-Chr4:28214982 | dispersed | |
| Ceso | Ceso-Chr2:27752357 | Ceso2g01372 | Ceso-Chr2:27914846 | proximal |