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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g01375 ATGGCGATCATAGAACTTCAAGTACATGTAGATTGTCCCGGCTGTGAGAACAAGATCCGGAAATCTCTTCAAAAACTCAAAGGGGTGGAGAACGTAGAAATAGACATGGCATTACAGAAGGTGACGGTGACAGGATACGCCGACGAGAAAAAGGTGTTGAAGACGGTGAGAAAAACCGGCCGCCGAGCCGAGATCTGGAGCGTACCCTACAATCCCGAGATCCGCAGCCATAATTACAACGTTAATCAATATGCTCAACAACAACAGAATGGTAATGGTAACGGTGGGTCTGCAGCCGCCAACGCCGGCCCCACGGCGACATTCTACACACGGCAGCCGTCTTCGGCATCATCGTACAATTACTACAAGCATGGTTACGATAACCACCAGAGCTATAACCCGATTCAGTCCTCCGGTTTAATCGGACACCAGACCGGAGCTGCCTTTAGTGATGAAAATACCAATGCTGCATGTAACATCATATGTCATATGACACAATGGAAAAACCAACAAAATTGCGCATTAGATATACACAAAAAAGCTCAGTTGTGGCTTGAGCCTGGGCCTAGTGAGCTAGAAGCTCAGAGTGGGCATGGCTTCAAAGCCGATCAAACTGAAACTTTGAAGGTAGATGCAAAGAACCCGACTTGA 651 47.47 MAIIELQVHVDCPGCENKIRKSLQKLKGVENVEIDMALQKVTVTGYADEKKVLKTVRKTGRRAEIWSVPYNPEIRSHNYNVNQYAQQQQNGNGNGGSAAANAGPTATFYTRQPSSASSYNYYKHGYDNHQSYNPIQSSGLIGHQTGAAFSDENTNAACNIICHMTQWKNQQNCALDIHKKAQLWLEPGPSELEAQSGHGFKADQTETLKVDAKNPT 216
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g01375 216 Gene3D - 2 65 - -
Ceso2g01375 216 CDD HMA 5 64 IPR006121 GO:0046872(InterPro)
Ceso2g01375 216 ProSiteProfiles Heavy-metal-associated domain profile. 1 64 IPR006121 GO:0046872(InterPro)
Ceso2g01375 216 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 3 160 IPR045181 GO:0046872(InterPro)
Ceso2g01375 216 MobiDBLite consensus disorder prediction 190 216 - -
Ceso2g01375 216 SUPERFAMILY HMA, heavy metal-associated domain 4 67 IPR036163 GO:0046872(InterPro)
Ceso2g01375 216 Pfam Heavy-metal-associated domain 8 61 IPR006121 GO:0046872(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g01375 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:27996406 Ceso2g03781 Ceso-Chr2:92668221 dispersed
Ceso Ceso-Chr2:27996406 Ceso3g02513 Ceso-Chr3:52975414 transposed