AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g01383 ATGGTGGAGGTGAATAGTAATGGCGGTGATGAGAAGAGGAATAACAATAGCAGCAATAGGTGGAGGAGGCGGTGGGGAGTTTTTGGAGCTCTCGTCGCTGTTTTAGCTGCCATATATCTCAATCCTCGGTGGCATTTGTACACAATTTCATTGTTTCATAAACCCTACCTCTGTTCTGAGAGAGACACTACATGCCTTGGCGACCACGTAAGTGGCCCTAGGCAAGGATTTCTAGAACATTGGTTTCTAAGGAAGGGATTAGGAGATGTAAGGGGAAAACAAGGAGTAGTTAGTGGTCAAAGAGATTTGAAGGATACATGTGAATATACAGGCATTGTTGAGGACTGCTGCTGTGACTATCAAAGCGTTGACGATGTTAATGGAGCAGTTTTAAATATCTTGTTGCAAGAGCTTGTTGCCACTCCTTTCTTCCGATATTTCAAGGTTAAGTTATGGTGTGATTGCCCCTTCTGGCCTGATGATGGTATGTGCCGCCTTCGTGATTGCAGTGTCTGTGAGTGTCCAGAAAATGAATTTCCTGAACCCTTTAAGAAACCGTCTCTGCATATTCTTCCGAAAGATGATCCTGTATGTCAAGAGGGAAAGCCAGAGTCTACTGTTGATCGTACCCTAGATGCTAAATCGTTTAGAGGCTGGGTAGAAATAGATAATCCATGGACTCATGATGATGAAACTGACAATGGTGAAATGACGTACGTTAATTTGCAACTGAACCCTGAACGCCATACAGGTTACGCAGGGCCATCGTCAAGAAGAATATGGGATGCTATATACACAGAAAACTGCCCAAGATATGCATTTGGAGAGATGTGCCCAGAGAAAAAAGTACTATACAAGTTAATATCTGGTATGCACTCCTCAATTTCAATCCACATAGCTGCTGATTATCTCCTCGATGAGACTACCAATCAGTGGGGTACAAATCTTGAATTGATGCATGATCGTGTCCTGAAACATCCTGATCGCGTTCAGAACTTGTACTTCACTTTCCTATTTGTTCTTAGAGCCGTAACAAAAGCGGCTGCTTACTTGGATCAGGCTGAGTATGACTCCGGTAACCATGCGGAGGATCTGAAAACCCAATCGTTGATACGACAACTGGTTCACAATCCCAAGTTGCAAGCTGCATGTGCTCTTCCATTTGATGAAGCTGAAATGTGGCAAGGCCAAGGTGGACCCATACTCAGACAACAAACCCAAAATCAATTTCGGAACATAAGTGCACTAGTGGACTGTGTTGGGTGCGAGAAGTGTCGTCTTTGGGGAAAGCTTCAGCTTCAGGGCCTTGGAACTGCATTAAAAATTCTTTTCTCTGTGAATGATCAGAGAAACCCACATTTGCAGTTACAAAGAAATGAAGTGATTGCTTTAATTAATCTACTAAATCGGCTCTCGGAATCTCTTATATATGTTACTAAAATGGGGTCATCTGCAAATAAAATGAGTTCGTTTCGTGGACCATGGGGATCAATCTTAGCTCATTGGTGGAAGAAATTGTTGAGATCTAACTAG 1533 42.86 MVEVNSNGGDEKRNNNSSNRWRRRWGVFGALVAVLAAIYLNPRWHLYTISLFHKPYLCSERDTTCLGDHVSGPRQGFLEHWFLRKGLGDVRGKQGVVSGQRDLKDTCEYTGIVEDCCCDYQSVDDVNGAVLNILLQELVATPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPENEFPEPFKKPSLHILPKDDPVCQEGKPESTVDRTLDAKSFRGWVEIDNPWTHDDETDNGEMTYVNLQLNPERHTGYAGPSSRRIWDAIYTENCPRYAFGEMCPEKKVLYKLISGMHSSISIHIAADYLLDETTNQWGTNLELMHDRVLKHPDRVQNLYFTFLFVLRAVTKAAAYLDQAEYDSGNHAEDLKTQSLIRQLVHNPKLQAACALPFDEAEMWQGQGGPILRQQTQNQFRNISALVDCVGCEKCRLWGKLQLQGLGTALKILFSVNDQRNPHLQLQRNEVIALINLLNRLSESLIYVTKMGSSANKMSSFRGPWGSILAHWWKKLLRSN 510
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g01383 510 PANTHER ERO1-RELATED 104 484 IPR007266 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0015035(PANTHER)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0034975(PANTHER)|GO:0071949(InterPro)
Ceso2g01383 510 Pfam Endoplasmic Reticulum Oxidoreductin 1 (ERO1) 133 476 IPR007266 GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro)
Ceso2g01383 510 SUPERFAMILY ERO1-like 118 487 IPR037192 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g01383 K10950 ERO1-like protein alpha [EC:1.8.4.-]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:28263588 Ceso4g01589 Ceso-Chr4:28117637 dispersed