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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g01415 ATGGCCAAGGTGGCTTCAATTAACTTGTATAATTCATTGTTTTTGCAGCAAAATATCGTTGTGAAAGTGGCCATGTTTGATGCCAAGAAAACTCGTAAGGCTATGAAGATCGCCGTTGGTGTCTCTGGCGTGGAATCAGCGGCTCTCATTGGTTCAAATAAAGATCAAATCAAGGTGACCGGGGAAGGAATTGACTCCGTCGAACTCGCGATGCTGCTAAGGAAAGGTGTAGGATGCACTGAACTGGTGAGTGTTGGTCCGGTAGAGGAGAAGAAACCCGCTGCCGCACCCGCCACTCCTGCCGCCAGTCAACCGCCAGCTACAGTGGTGCCGCTGGAAGTTTATCCTCACCATCATTATAGCAGCTATGGAGGGCCGTACTACCATGTCTATGAAACTCCCAGCAACGACGATCCCTCTTGTACCATCATGTAA 435 49.43 MAKVASINLYNSLFLQQNIVVKVAMFDAKKTRKAMKIAVGVSGVESAALIGSNKDQIKVTGEGIDSVELAMLLRKGVGCTELVSVGPVEEKKPAAAPATPAASQPPATVVPLEVYPHHHYSSYGGPYYHVYETPSNDDPSCTIM 144
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g01415 144 PANTHER OS04G0464100 PROTEIN 17 144 IPR044296 -
Ceso2g01415 144 Gene3D - 14 91 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g01415 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:28839861 Ceso2g01415 Ceso-Chr2:28970004 dispersed
Ceso Ceso-Chr2:28920602 Ceso2g01415 Ceso-Chr2:28970004 dispersed
Ceso Ceso-Chr2:28970004 Ceso2g01423 Ceso-Chr2:29062155 dispersed
Ceso Ceso-Chr2:28970004 Ceso2g01416 Ceso-Chr2:28987939 tandem