AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g01449 ATGGCGGCAATACTGGCTTCTAACAGCTGCTATTGCCGTGATATGCAATTGGTAAATCAAGGGAGAACAATGGACAACCTCAGCTTCTCAAGATCGATTTCCACCCTGAAGGTGGATAGGCATGAATGCACTTTGCCCAAAGTTGAGAGGTTTCGCGGGTTTCATATTAAGATGCAGCAGACGGAATCATCCATAAAACCTGGCATCAATGGTCGACCAGCAAAGTTGGATACAAATGGTCAACCTGCGAAGTTGGGTGCGAATGGCAAACCAGTGAATTTGGGTGCCAACGGTCAACCTGTAAAGTTGGGAAGCAATGGTCAAGCAATCACCATGGTTCCTACAAGTGAGGTGGTGAAAAACAAGCCTCTAAGAGTAAATGGATCAACACAAGTTGTTAATGGAACAAGTCTTGTTAAGAGAGGGACCACTGAGGCACCAGTTAAATCTCTAAAAGTTAGAGAACCCACTGGATTTCTGCCTCCTGAGGAATTAAAGGTCTTGCCATCAGATGAAAGTTTCAGCTGGGCAAATGAAAATTACAATTCGGTACAAAGATCAATAGACGTGTGGTCTTTTGTTCTTTCTCTTCGTGTTCGTGTTATGTTCGACAATGCAAAGTGGGCATATCCTGGAGGCTTCACAGAGGACAAGCAGAAAATCAGAAGAAGGAAAACAGCTGCATGGCTAAGAGAGTGTGTGCTTCAACTTGGGCCAACCTTTATCAAACTTGGGCAGTTATCTTCAACAAGGTCAGATCTATTTCCACGTGAATTTGTCGATGAGCTGGCCAAGTTACAGGACAGAGTACCTGCCTTTTCACCAGCAAAAGCCAAAGGTTTCATAGAGAAAGAATTGGGAGCTCCAGTTGATATAATCTTTAAGGAGTTTGAAGAGCGACCAATTGCAGCTGCTAGTCTGGGTCAGGTACATCGTGCAATATTACATAACGGAGAAAAAGTAGTTATTAAAGTTCAAAGACCTGGTCTGAAGAAACTTTTTGACATTGATTTACGAAATCTAAAGCTAGTTGCCGAGTATTTTCAAAGAAGTGAATCACTCGGTGGTCCAACAAGGGATTGGATAGGCATCTACGATGAATGTGCGAAGATTTTGTACGAGGAGATTGATTATATAAATGAAGGGAAAAATGCTGATAGATTTCGTCGAGATTTTCGTAATATAAAGTGGGTCCGAGTGCCTCAAGTATTCTGGGATTATACTGCACAGAAGGTGCTGACATTGGAGTATGTTCCAGGCATTAAGATTAATAACCTAGATGCGATAAAAGAAAGGGGATTCAGTCGATCCCAAATCTCTTCGCATGCCATTGAATCGTACTTAATTCAGATACTGAAAACCGGTTTCTTTCATGCTGATCCTCATCCTGGAAATCTTGCTATCGATGTGGATGAATCATTAATCTACTATGATTTTGGCATGATGGGGGAGATCAAGTCCTTCACAAGAGAAAGATTGATGGATCTTTTCTATGCAGTTTATGAAAAAGATGCAAAAAAGGTTATGAACAGTTTGATAAGCCTTGAAGCGCTTCAACCTACTGGAGACATGTCAGCAGTTAGGAGATCTGTTCAGTTCTTTTTGGATAATTTGCTAAGTCAGTCACCAGATCAGGAGACCACTTTGGCTGCAATAGGCGAGGATTTATTTTCTATAGCGACGGATCAGCCTTTCCGGTTCCCATCCACCTTCACGTTTGTAATTAGGGCATTTTCCACTCTTGAAGGAATTGGCTACTCACTTGATCCAGATTTTTCATTCGTCAAGATTGCTGCACCTTATGCACAGGAGCTGTTAGATCTCAAACAACAGCGGCGCAGTGGAACACAACTTGTCCAGGAAATACAAAAACAAGCCAATGACGCAAGATCATACACCATGTCGATGCCTTACAGAGTTCAGCGGATTGAAGAGTTTGTGAAACAACTAGAATCAGGAGACCTTAAACTTCGTGTCAGAGTTCTCGAGTCTGAACGAGCAGCTCGGAAGGCAACAATAATGCAGATGGCAACCTTGTACACGGTTATTGGGGGTACACTCGTAAATGTAGGCGTCACGTTTAGCAGCCAAGGCAGCCAACTTATAGCAAATGGGTCATTTGTTGCTGCAGGTGTTTTTGTAGCCCTGCTCCTTAGGTCAATGCAAAGGGTGAAGAAGCTTGATAAATTTGAAAAGATGATATAG 2205 42.45 MAAILASNSCYCRDMQLVNQGRTMDNLSFSRSISTLKVDRHECTLPKVERFRGFHIKMQQTESSIKPGINGRPAKLDTNGQPAKLGANGKPVNLGANGQPVKLGSNGQAITMVPTSEVVKNKPLRVNGSTQVVNGTSLVKRGTTEAPVKSLKVREPTGFLPPEELKVLPSDESFSWANENYNSVQRSIDVWSFVLSLRVRVMFDNAKWAYPGGFTEDKQKIRRRKTAAWLRECVLQLGPTFIKLGQLSSTRSDLFPREFVDELAKLQDRVPAFSPAKAKGFIEKELGAPVDIIFKEFEERPIAAASLGQVHRAILHNGEKVVIKVQRPGLKKLFDIDLRNLKLVAEYFQRSESLGGPTRDWIGIYDECAKILYEEIDYINEGKNADRFRRDFRNIKWVRVPQVFWDYTAQKVLTLEYVPGIKINNLDAIKERGFSRSQISSHAIESYLIQILKTGFFHADPHPGNLAIDVDESLIYYDFGMMGEIKSFTRERLMDLFYAVYEKDAKKVMNSLISLEALQPTGDMSAVRRSVQFFLDNLLSQSPDQETTLAAIGEDLFSIATDQPFRFPSTFTFVIRAFSTLEGIGYSLDPDFSFVKIAAPYAQELLDLKQQRRSGTQLVQEIQKQANDARSYTMSMPYRVQRIEEFVKQLESGDLKLRVRVLESERAARKATIMQMATLYTVIGGTLVNVGVTFSSQGSQLIANGSFVAAGVFVALLLRSMQRVKKLDKFEKMI 734
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g01449 734 CDD ABC1-ADCK3-like 265 512 - -
Ceso2g01449 734 Pfam ABC1 atypical kinase-like domain 265 511 IPR004147 -
Ceso2g01449 734 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 141 669 IPR050154 GO:0046467(PANTHER)|GO:0055072(PANTHER)|GO:1901031(PANTHER)
Ceso2g01449 734 SUPERFAMILY Protein kinase-like (PK-like) 267 515 IPR011009 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g01449 K03688 ubiquinone biosynthesis protein
Ceso2g01449 K08869 aarF domain-containing kinase
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:30007867 Ceso4g01645 Ceso-Chr4:29247617 dispersed
Ceso Ceso-Chr2:30007867 Ceso1g04292 Ceso-Chr1:107153007 transposed