Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g01451 | ATGTCAACCACCACCACCTCGTCTTCTTCGTCAGGCGACGGAGGAGACGGTGGCAATGGCGGTGGTGCCGGAGAGTTCGAAGAACCGTCGCATTCTCGCCAACGATTCAACACCGCCGTCTGGCCGGAGCCTTTCCTTGAAGCTCTCGCTACTCAGATCGCCATTGACGCCGCTCTCTCCTTCGGCCGCCTTGCCGCTGCTCCAGCTCTCTCCAATCTCTTCCAGGTATCAAAATCACACATCCTTATTATCATTTCAAATCGCTTATATACTTTTCACTGTATTATTATGTGCATATTTCACTCTGATTTCGCGTTTAGATTATATCAGTGTAATAATATTTTATTGCAATTTAAGAAAAAGAACTCTCCCACTGTCCCACTTAGATGTCACATAAATTGCGGAAAAGATCCTAAAAGTAGGAAAGTTTGTAGAACTTGGAGAACTGTATCCCAGTCTGACCTCCTATGGCAAAACCTAACACGACGTATTTGGCATCGCAACCACCTCCTCCATGCCTCTTGGCATGATGAATACATCTACCGCCACCGAACTGCTAGCAACTTCCGTGTGCGGAGGTGTTTGTATAGCACCCTGCACTTCCCTCCGAATGATAACAACGCCAACGATAGCCTCTCTTGCCGTTGCCTTGCACTATCCGATTACCACCTAGCCGCAGGATTCTCTGATGGGTCCGTTCGCCTATTTCACCTCCCCACAAGGCTCCACTTGTCCACCTTCCGCCCCCATCAACGCAATAACCTTGGCCCATTCTCCCGTGCTGTCTGTGGGATCTTTTTTACGGATAATAGGCTAGTTTTTGCCTCCCTTGACGGTGATATTCATGTTGCATCCGTCAATGCTCCAGGAGTTCCACGGAGGGCTCACTTGGGGGACGTGGTCACAGATGGTGTTCTTGTGGATTTCACCGGTTGTAATCAGTGGTGGATCGGCCTTTACGCAGGTGTTCCAAACCGTGCCTTCCATGTGCGAAATGGCAATACAGAAGAACTCGTATTCATTGGTGGGACATTGACCGACCCAGACGCTGTAACGGGTTGGCACCTATTGACGGACCTAAGCGAGCAGGTAGGGCGAATCCGTATAACAAGCGAAGACCTGGCAGTGGCCTTCACAAGCAGCAAGGTCCTTGTATTTGACTTGAGAAGCCAAATGATATTAGGAGAAGAAGAGTTTATGAGGCGTATTAACGTAGGTGCAGCTGATGCGTACGATAAGGCCCTGATGTTCGTAAATAGTAGGGGGGTGGGTAACGTGCGGGAGGTGGGTAGCTTGGAGGAAATATGTAGGTTCATGGCAAGGGGAGGGGTGGTGGGGTGCATGAATGGGGGTTACTGTATCATATGCTGCAGTGGGGGTGGGATTAGGGTTTGGGAGTTGAACCATGGGGAGTATTTGTACAGTTTTAGGGAAAGGGTCGGAGATAGTACGAGTGCGCTGACTGCGGATGAACGGTATGTAGCGGCTTGTACTAGTGACAACACCATTCACCTATGGGACTTTGGAGCACAACCCTTGTAG | 1542 | 49.81 | MSTTTTSSSSSGDGGDGGNGGGAGEFEEPSHSRQRFNTAVWPEPFLEALATQIAIDAALSFGRLAAAPALSNLFQVSKSHILIIISNRLYTFHCIIMCIFHSDFAFRLYQCNNILLQFKKKNSPTVPLRCHINCGKDPKSRKVCRTWRTVSQSDLLWQNLTRRIWHRNHLLHASWHDEYIYRHRTASNFRVRRCLYSTLHFPPNDNNANDSLSCRCLALSDYHLAAGFSDGSVRLFHLPTRLHLSTFRPHQRNNLGPFSRAVCGIFFTDNRLVFASLDGDIHVASVNAPGVPRRAHLGDVVTDGVLVDFTGCNQWWIGLYAGVPNRAFHVRNGNTEELVFIGGTLTDPDAVTGWHLLTDLSEQVGRIRITSEDLAVAFTSSKVLVFDLRSQMILGEEEFMRRINVGAADAYDKALMFVNSRGVGNVREVGSLEEICRFMARGGVVGCMNGGYCIICCSGGGIRVWELNHGEYLYSFRERVGDSTSALTADERYVAACTSDNTIHLWDFGAQPL | 513 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g01451 | 513 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 494 | 508 | IPR019775 | - | |
| Ceso2g01451 | 513 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Ceso2g01451 | 513 | Gene3D | - | 207 | 512 | IPR015943 | GO:0005515(InterPro) | |
| Ceso2g01451 | 513 | PANTHER | WD40 REPEAT PROTEIN 12, 37 | 23 | 471 | - | - | |
| Ceso2g01451 | 513 | SUPERFAMILY | WD40 repeat-like | 209 | 509 | IPR036322 | GO:0005515(InterPro) | |
| Ceso2g01451 | 513 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Ceso2g01451 | 513 | SUPERFAMILY | F-box domain | 141 | 506 | IPR036047 | GO:0005515(InterPro) | |
| Ceso2g01451 | 513 | Gene3D | - | 133 | 191 | - | - | |
| Ceso2g01451 | 513 | SMART | WD40-4 | 192 | 237 | IPR001680 | GO:0005515(InterPro) | |
| Ceso2g01451 | 513 | SMART | WD40-4 | 240 | 285 | IPR001680 | GO:0005515(InterPro) | |
| Ceso2g01451 | 513 | SMART | WD40-4 | 469 | 507 | IPR001680 | GO:0005515(InterPro) | |
| Ceso2g01451 | 513 | SMART | WD40-4 | 431 | 466 | IPR001680 | GO:0005515(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g01451 | - | - |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Ceso | None | None | None | TF | SAP |