Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g01456 | ATGTCTTCTTCTTCTCTCAAACCCACTCTTGATCTTCCTCCTTCTGGCGAGATCCACGTCATTGTGGGCCCCATGTTCGCCGGCAAGACCACTGCCCTTCTTCGCAGGATCAAATCTGAAGGAATCAATGGCAGGAAAGTAGCAATGATAAAGTCAAGCAAAGATAACCGATATGCGATTGATTCAGTTGTAACCCATGATGGAACTAAGTACCCATGTATGGCACTCCCTGATCTCTTGTCTTTTAAGCAAAAACTTGGAGAAGAAGCTTATGAAAAGCTGGATGTTATTGGCATAGATGAGGCCCAATTCTTTGATGATCTCTATGACTTTTGTTGTAAAGCTGCTGACCATGATGGAAAAACTGTTATAGTTGCTGGTCTTGATGGTGATTACTTAAGAAGGAACTTCGGTCCAGTTCTTGATCTAGTACCACTTGCTGACACCATAACCAAATTAACTGCCCGATGTGAACTATGCGGCAAACGAGCCCACTTCACCTTACGGAAGACTCACGAGACAAAAACGGAACTCATAGGTGGTGCAGATGTCTATATGCCCGTTTGCCGTCAGCATTATGTTAACGGACAAATAGTGATCAAAGCTGCTAGAAACATAATAGACGAATCTACCAAGTTTCAAAGCGAACAAGAGCCAGAAGTGATCTCAACAACTTTAACTTAA | 684 | 42.84 | MSSSSLKPTLDLPPSGEIHVIVGPMFAGKTTALLRRIKSEGINGRKVAMIKSSKDNRYAIDSVVTHDGTKYPCMALPDLLSFKQKLGEEAYEKLDVIGIDEAQFFDDLYDFCCKAADHDGKTVIVAGLDGDYLRRNFGPVLDLVPLADTITKLTARCELCGKRAHFTLRKTHETKTELIGGADVYMPVCRQHYVNGQIVIKAARNIIDESTKFQSEQEPEVISTTLT | 227 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g01456 | 227 | PANTHER | THYMIDINE KINASE | 14 | 215 | IPR001267 | GO:0004797(PANTHER)|GO:0004797(InterPro)|GO:0005524(InterPro)|GO:0046104(PANTHER) | |
| Ceso2g01456 | 227 | Pfam | Thymidine kinase | 16 | 193 | IPR001267 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Ceso2g01456 | 227 | ProSitePatterns | Thymidine kinase cellular-type signature. | 180 | 193 | IPR020633 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Ceso2g01456 | 227 | Gene3D | - | 154 | 195 | - | - | |
| Ceso2g01456 | 227 | FunFam | Thymidine kinase | 154 | 196 | - | - | |
| Ceso2g01456 | 227 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 154 | 196 | - | - | |
| Ceso2g01456 | 227 | PIRSF | Tdk | 14 | 206 | IPR001267 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Ceso2g01456 | 227 | FunFam | Thymidine kinase | 13 | 153 | - | - | |
| Ceso2g01456 | 227 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 16 | 154 | IPR027417 | - | |
| Ceso2g01456 | 227 | Gene3D | - | 12 | 153 | IPR027417 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g01456 | K00857 | thymidine kinase [EC:2.7.1.21] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ceso | Ceso-Chr7:36685027 | Ceso2g01456 | Ceso-Chr2:30365065 | dispersed | |
| Ceso | Ceso-Chr1:70600183 | Ceso2g01456 | Ceso-Chr2:30365065 | wgd |