AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g01511 ATGTCACCACCAACCACCACCATCTATCTCATCTTCATATTCTCTCTTTTCATCCCACCACACCCATCCACCGCCGATCAATCATTCATCTCCCTCCTCATAACCCAAAACGGCCTTGATTTCGTTAAAGATTTGCTCACATCGGAAGCCATCTCTATGCTCACACCCCTTTGGCTCAACCAAATCGAAAAGACTGTTAAAATCCCTTTAATTGGTAAAGTGCATATTGTTCTTTCGGACATCAGTGTCAATCGGGTCAAAATCGGGTCGTCATACATTAGACCCGGTGTATCCGGTGTTTCAATCGATGGGTCGGAGGTGACTTGTGAGTTGAGTATGAAATGGCATTATTCTTATGGAACTTCTTCTTGGATTGCCCCGATTTCGATTTCGGATAGTGGGACTGCTTCTGTTGAGGTTAATGGAGCGGGAGTTGATTTAACACTAGGTTTGGATAATGAAGAAGGATCTTTAAAACTTTCCACTGTCGATTGTAATTGTCATATACATGATATGGAGATAGACCTACATGGAGGAGCATCTTGGCTCTATCAAGGGATAGTGGATGCTTTGGAAAAACAAATAATGTCAGCCATAGAGAAAGCAATCACAGAGAAACTAAATGCCGGAGTTTCAAAGCTTGGATCTTTTCTACAAACTCTCCCAAAACAAATTCCAGTCGACGACATTGCATCGTTGAACGTTACATTCGTTAACGCCCCTTTCTTGAGCGACAATTCATTAGGGTTCGAGATAAACGGGCTATTCGTAAAATCTCAAAAAAACACGCCCTCGCTCCACAACGCTTTACGATCGCCCGTTTCTTGTTCAGATTCCTCAAAAATGGTCGCGATTGCGCTAGACCAAGCTGTTTTCGTATCGGCAGCGGCCTTGTACTATGACGCTATGTTTATGCATTGGGTTGTGGATAAAGCTCCGGAGCAATCGTTTTTGAATACGGCTGGATGGAGGTTTATCGTTCCCCAGCTCTACAAAAAATACCCAAATGCCGATATGGATTTGGACATCTCACTGTCTGAACCTCCGCTTGTGCAGATATTGTGGCAGAATATTGAAGCCACGGTTTATTCAGATGTGATCGTAAATGTTCTTGAAGGCGATGAGACAATACCCGTTGCTTGTATCTCATTGGCAATCGCTGGCACCGGTTCAGTTGAAGTTATCGAAAATAATCTTGCCGGTCATTTGAAATTAGATGATTTCACGATGTCGTTGAAATGGAGCAAGATTGGCACGTTGCACATGTTTCTGATTCAGCCGGTGATGTGGACGCTAATCGAAACTGTTTTCGTGCCATATGCGAATGCACGTCTCGGGAAAGGATTCCCGCTGCCAATAATCAATGGATTTACGCTTCAAAATGCCGAGATAACGTCCTCTGATTCTAGAATCACGGTCTGTAGCAACGTCATTTATCAAAAAGAATCGTTTGATCGTAGCAGCATTGCTTCATGA 1476 43.36 MSPPTTTIYLIFIFSLFIPPHPSTADQSFISLLITQNGLDFVKDLLTSEAISMLTPLWLNQIEKTVKIPLIGKVHIVLSDISVNRVKIGSSYIRPGVSGVSIDGSEVTCELSMKWHYSYGTSSWIAPISISDSGTASVEVNGAGVDLTLGLDNEEGSLKLSTVDCNCHIHDMEIDLHGGASWLYQGIVDALEKQIMSAIEKAITEKLNAGVSKLGSFLQTLPKQIPVDDIASLNVTFVNAPFLSDNSLGFEINGLFVKSQKNTPSLHNALRSPVSCSDSSKMVAIALDQAVFVSAAALYYDAMFMHWVVDKAPEQSFLNTAGWRFIVPQLYKKYPNADMDLDISLSEPPLVQILWQNIEATVYSDVIVNVLEGDETIPVACISLAIAGTGSVEVIENNLAGHLKLDDFTMSLKWSKIGTLHMFLIQPVMWTLIETVFVPYANARLGKGFPLPIINGFTLQNAEITSSDSRITVCSNVIYQKESFDRSSIAS 491
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g01511 491 SMART bpi2-2 277 475 IPR001124 GO:0008289(InterPro)
Ceso2g01511 491 Pfam LBP - BPI - CETP family, N-terminal domain 38 214 IPR017942 GO:0008289(InterPro)
Ceso2g01511 491 Gene3D - 32 467 - -
Ceso2g01511 491 PANTHER OS06G0309200 PROTEIN 11 483 IPR045897 -
Ceso2g01511 491 CDD BPI1 29 257 - -
Ceso2g01511 491 SMART bpi1-3 34 261 IPR017942 GO:0008289(InterPro)
Ceso2g01511 491 PIRSF Lipid-binding-protein 5 484 IPR030675 GO:0005615(InterPro)|GO:0008289(InterPro)
Ceso2g01511 491 Pfam LBP - BPI - CETP family, C-terminal domain 251 477 IPR001124 GO:0008289(InterPro)
Ceso2g01511 491 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 32 244 IPR017943 GO:0008289(InterPro)
Ceso2g01511 491 FunFam phospholipid transfer protein-like 37 219 - -
Ceso2g01511 491 Gene3D - 37 219 - -
Ceso2g01511 491 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 247 479 IPR017943 GO:0008289(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g01511 - -