AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g01512 ATGCAATTCTCCATGGCACTCACAACCCCTGGTGGGTTCCCATCTCTTCCCCCATTTCACCAACCCATCTCACACAAACACCCACCAACAATAACCCTTCAAAGACCAACAAAACCCCAAGATTCTTGCATAAAATCGGTTAACAATTCTGGGTTTTTATCAGCAATTGGGAACGCAATTGAAGAAGAGGAGTATAGGAAGGCTAGGGCTGAGGTTATTAGAAAAGGAACAGGGTTAGAAGGTTACACAATTGAGGGTATTTCAATTGGGGGTCATGAAACTTGTGTTATTGTTCCTGAATTCAAGTGTGCATTTGATATTGGAAGGTGCCCAGCAAGAGCTGTTGCCATGAATTTCTTGTTTATTACTCATGCTCACCTTGATCACATTGGTGGGCTACCAATGTACGTTGCGACTCGTGGTTTGTACAACTTGAGTCCTCCAACTGTATTTGTGCCTCCTTCCATTAAAGAAGATGTTGAAAATTTAATGGAGCTTCACAGGAAGATGGGTCAGGATGAGTTAAATCTTGATTTGGTTGCATTGGATGTAGGAGAAACGTACGAGCTACGAAATGACCTTGTTGTACGCCCGTTTAAAACTCATCACGTAATCCCAAGTCAGGGTTATGTTATTTACTCGGTTCGCAAGAAGCTAAAGAAGCAATATGCTCATTTGAAAGGAAGAGAGATTGAGAAAAAGAAGAAATCTGGTGTTGAGATCACGGATATCATATTGTCTCCGGAGGTGGCATTCACCGGAGATACAAATTCCGATTTTCTACTTGATCCACGCAGTTCCGATGCCTTGCGGGCCAAAGTTCTAATAACTGAGGCGACCTTTTTGGATGAGAAATGCGATATCGAGCATGCACGAGAGCATGGTCACATGCATATTGATGAGATTACCGAGCATGCTAAGTGGATTAGGAACAAAGCAATTCTTTTGACTCATTTCTCCTCTCGCTACCATATCGAGGATATTCGTCAAGCTGCAGCAAAGTTGCAGTCGAAGATTCAAGGAAAAGTGGTTCCACTTACGGAAGGTTTTAGATCAATGTATTCGGCATAG 1071 42.58 MQFSMALTTPGGFPSLPPFHQPISHKHPPTITLQRPTKPQDSCIKSVNNSGFLSAIGNAIEEEEYRKARAEVIRKGTGLEGYTIEGISIGGHETCVIVPEFKCAFDIGRCPARAVAMNFLFITHAHLDHIGGLPMYVATRGLYNLSPPTVFVPPSIKEDVENLMELHRKMGQDELNLDLVALDVGETYELRNDLVVRPFKTHHVIPSQGYVIYSVRKKLKKQYAHLKGREIEKKKKSGVEITDIILSPEVAFTGDTNSDFLLDPRSSDALRAKVLITEATFLDEKCDIEHAREHGHMHIDEITEHAKWIRNKAILLTHFSSRYHIEDIRQAAAKLQSKIQGKVVPLTEGFRSMYSA 356
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g01512 356 Pfam Beta-lactamase superfamily domain 116 319 IPR001279 -
Ceso2g01512 356 MobiDBLite consensus disorder prediction 16 40 - -
Ceso2g01512 356 Gene3D - 82 351 IPR036866 -
Ceso2g01512 356 PANTHER TRNASE Z TRZ1 39 350 - -
Ceso2g01512 356 SUPERFAMILY Metallo-hydrolase-oxidoreductase 115 336 IPR036866 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g01512 K00784 ribonuclease Z [EC:3.1.26.11]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr1:84913249 Ceso2g01512 Ceso-Chr2:32039836 dispersed