AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g01519 ATGGACGTACTCTTCAATTCAATCGACGTTCGTGACCTACTCTCCTCCCACGATCTCGACGACTCCTCGCCGCTCTCCGCCCCGGATCTCCGCCTCCTCATCGACCGTCTCCAAGTCCGTTCACTCGACATCAAGTCCAAAGTCCACAATTACGTACTCTCTCACCACCACGACTTCTCCGCCCTGTTCTCTCGCTGCTCCGATGCCGTTATCAACTCTCACCAACTCTCCGATCAACTATCCGACCTAATCGATCTGTTATCATCATCGTCGTCGGATCGTCAGCCGATCGATGTTCAGATCAAGGAAACAGTCGATGAGGTCAGGAGGAAACGAATTGAAGCCAAGGAGAAGAAGGAGACGCTGGATTTAGTGAAGGTAGTGTTGAGATTGAGCCAAGAGTTGAGTGTTGTGGAGAGTGATTTGAAGGCTGGGAAGGTTGTCGAGGCCGCGGAGGCGATTACGGAGTTGAAGGTGGCGTTGCGAGTGAGGGAGAATGCGGAGGATCGGTCGGAGGATAGGGAGCCTATGGTGTTTGGCTTGTTAAGGAAGAAATGGACAGATTGCTTTGAAGAGATACAAGAGTTGCTAGTGAAGTTTGTGGAAAATGCAGTGAGATTTGATCAGCAGTCCAATGCTGTTTGTGTCAAGAATACAATGGCTATGAATGATATTCAAGGGGTTGAGCTTAGTACTGTGTTGAAAGCAATGCATGTGGTTGGCATTCTAGATTATGGGCTTGCCAAAGTATCAGACTTGATGATCAGATATGTGATAGCTCCTGCAGTGCAGAGTGGTCCTCATAGTTTTTCTGTAGAGGAGAGAACACTAGATCCAGGACATATGGCTGAGGTGGTTCTGAGGATAACCCCGCCTTCTGATCCTCAGCATGATGACTACATGTGGCTTGTCATCTCATGCTTAAGGTTGAGAACTTGGATGCTGAAAACTATATATTCTGGACTTAATGTGGTCATTCAATTTATTTTCAACTTTATTTGTTTTAAAAATTCTTCCTGGATGCGATACTTTGGAAGATTGACATGGCCTCGGATGTCGGAATTGATCATTTCAAACTTTCTTTCCAAGATTGTTCCTAATGATGCATCCAAACTTGCTGACTTCCAAACAGTAAGACAACTCACTTATGAGTTTGAGACATCTCTTAAAGAAGTTATGTTCATCTCCTCTGGCAAAGATGAAAGGTTGAGCAACTTTGCCGACAACGTTGAAGTTCATTTTGCTACAAGGAAGAAGGTTGAGATTTTAGCAACAGCCAGGGACCTGCTTTTACATTCAAATTTTAATCTTCCCAAGGACTATTCAAGGAAAAATACAGAGTTCAAGAATGGTGGTACTGTAGACTTACTTTTCTCGTCTGAGAGGTGTGTCATATCCGAAGCAGCTTCGCAGCTAATTGAACTCGTGCATCAAACACTCAACGATGTTTGCTTGTCATCTGCATCAGTGGCTTTAGAATTTTACCATGCTGCTAGGGATGCTCTACTTCTATATGAAGCTGTTATTCCTGTTAAGCTAGAAAGACAGCTGGATGGTATCAACCAGGTTGCCGTTCTCATTCATAATGATTGCCTATTCCTATCACAGGAGATTCTTGGCCTTTCATTTGAGTACCAGTCAGACTTTCCGACTTCCATGAAGGGAGCCGTGTTTATTGATTTGGGTATAAGATACAAGCTGATGGCAGAAGAGATATTACAAAGGCAAATACAGCTTGTTAAGCATAATTTAATGGAGGCTGTCGATGGTGCTGATGGATTTCAGAATACCCATCAACCAAGGCGATATGAATCTGCAAAATTCAGTATTGATCAGGTAGCTTTTATCCTTGAGAAAGTGCGCATAATATGGGAGCCACTATTGTTACCGTTGACTTATAAGGAAAGTATGTGCACAGTCGTGGAGGCTGTATGTTCTAGAATGACCAAAGATATACTACTTTTAGACGATATTGCAGCAGAAGAAACATTACAGCTTCAAAGGTTAATTCAGATGCTGCTGGAAAACCTTTCGGCTTTATTGGAGTCTCTGGCTGCTATGAATAATCAAACAACAAAACCACAAGGGGCATCATCAGGCTCTATTGATGATCTGATACCGTCACTGAATATGTTAGACCTGCCTCTGAAGTCCATCACTGCAAGTTGGGAAAGTGGGGAGCTGGCCAAGTGTGGTTATACTTCATCTGAGGTGAGAGACTTCATTAGAGCGATATTTACAGATTCACCGTTACGAAGAGAATGTTTATGGAGGATCGAAAATATCAAGTTTTAA 2295 43.36 MDVLFNSIDVRDLLSSHDLDDSSPLSAPDLRLLIDRLQVRSLDIKSKVHNYVLSHHHDFSALFSRCSDAVINSHQLSDQLSDLIDLLSSSSSDRQPIDVQIKETVDEVRRKRIEAKEKKETLDLVKVVLRLSQELSVVESDLKAGKVVEAAEAITELKVALRVRENAEDRSEDREPMVFGLLRKKWTDCFEEIQELLVKFVENAVRFDQQSNAVCVKNTMAMNDIQGVELSTVLKAMHVVGILDYGLAKVSDLMIRYVIAPAVQSGPHSFSVEERTLDPGHMAEVVLRITPPSDPQHDDYMWLVISCLRLRTWMLKTIYSGLNVVIQFIFNFICFKNSSWMRYFGRLTWPRMSELIISNFLSKIVPNDASKLADFQTVRQLTYEFETSLKEVMFISSGKDERLSNFADNVEVHFATRKKVEILATARDLLLHSNFNLPKDYSRKNTEFKNGGTVDLLFSSERCVISEAASQLIELVHQTLNDVCLSSASVALEFYHAARDALLLYEAVIPVKLERQLDGINQVAVLIHNDCLFLSQEILGLSFEYQSDFPTSMKGAVFIDLGIRYKLMAEEILQRQIQLVKHNLMEAVDGADGFQNTHQPRRYESAKFSIDQVAFILEKVRIIWEPLLLPLTYKESMCTVVEAVCSRMTKDILLLDDIAAEETLQLQRLIQMLLENLSALLESLAAMNNQTTKPQGASSGSIDDLIPSLNMLDLPLKSITASWESGELAKCGYTSSEVRDFIRAIFTDSPLRRECLWRIENIKF 764
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g01519 764 Pfam ZW10 C-terminal helical domain 609 759 - -
Ceso2g01519 764 Pfam Centromere-kinetochore protein zw10, middle domain 182 430 IPR048344 -
Ceso2g01519 764 Gene3D - 563 763 IPR046362 -
Ceso2g01519 764 Coils Coil 670 690 - -
Ceso2g01519 764 Coils Coil 101 121 - -
Ceso2g01519 764 PANTHER CENTROMERE-KINETOCHORE PROTEIN ZW10 4 761 - GO:0006888(PANTHER)|GO:0007094(PANTHER)|GO:1990423(PANTHER)
Ceso2g01519 764 Pfam Centromere-kinetochore protein zw10, C-terminal 458 586 IPR048343 -
Ceso2g01519 764 Pfam Centromere-kinetochore Zw10 N-terminal 37 132 IPR009361 GO:0000278(InterPro)|GO:0000775(InterPro)|GO:0005634(InterPro)
Ceso2g01519 764 Coils Coil 150 170 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g01519 K11578 protein transport protein DSL1/ZW10