Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g01539 | ATGATTAAGCAAATACTTAATAAGCTTCCTAGGAAGCCATCTTCCAAATCATCACACAATGATGAAGGAAACAATGCTATGGATTCCGCTTCGATAAATTCGAGCGGTGTAGGTGTTAATAATGGCGGTTCTAAGAGCAATTCGGCTAAATCGAATAACGAAACTAGTAAGAAGTTAGGTTCTATTGGGGGGAATCAAGTGGTGCAGGTATTGAATATGAATCATGCTTCTTATGAAGCATTGCCGAGTTTTCGAGTTGTATCTAGCTCGGAAAAACACGGCTTGTTCATTAAGAAGTTGAACATGTGTTGTGTGGTGTTCGATTTTAGCGATCCGTCTAAGGATTCGAAGGAAAAAGATGTTAAGAAACAGACCTTGCTCGAGCTCGTGGATTATGTTTCCTCGGCCACCTCGAAATTCAATGAGGTGACGATGCAGGAAATGGCGAAAATGGTGGCTGCTAACTTGTTTCGTGCTTTGCCGAATGCTAACCATGATAACAAGCTGCCGGATTTATACGATCAAGAAGATGATGAGTTTAGTATGGATCCATCGTGGCCGCATCTTCAAGTCGTCTATGAGTTCCTTCTTAGGTTTGTAGCTTCATCGGAAACCGATGCTAAACTTGCCAAAAGATACATCGATCATGCTTTCGTGTTGAAATTGCTCGATCTCTTTGATTCCGAGGATCAGAGGGAAAGGGAGTATCTGAAGACGATCTTGCATCGTGTGTATGGGAAGTTCATGGTTCATCGGCCGTTCATCAGGAAAGCGATCAACAATATCTTTTATCTGTTCATTTTCGAGACCGGGAAGCACAATGGGATAGGGGAATTGCTCGAGATTTTGGGTAGTATAATTAACGGGTTTGCTTTGCCTTTGAAGGAAGAACATAAGCAGTTTCTTGTTCATGCTTTGATCCCGCTTCATAAGCCGAGATGTTTGTCGACGTACCATCAGCAGCTCTTGTATTGCGTTGGTCAGTTTGTCGAGAAAGATTTTAGGTTGGCGGATACCGTGATTAGGGGATTGCTTAAGTATTGGCCCGTGACTAATAGCTCGAAAGAGGTGATGTATCTTAGTGAATTGGAGGAGATTCTTGAAGCTACACAGGCTGCGGAATTCGAACGGTGCATGGTCCCGTTGTTCCGTCAGATCGGCTACTGCCTCAATAGTTCACACTTCCAGGTGGCAGAACGTGCGTTATTCCTATGGAATAACGAGCATATAAGGAATCTAGTAATTCAAAACCGCAAAGTGATCCTGCCCATTATCTTCGCACCTTTGGAGAAGAACACACGAGGCCACTGGAACCAAGCCGTTCAAAGCCTAACGTTTAACGTTCGCAAGATGTTTTCAGACGCTGATGAATCGCTATTTCAAGAGTGCCTGGTGAAGTACCAACAAGATGAAGCCAAGGAGAAGGAAAGCCTCGCTAAGCGGCAGTTAACCTGGAGCCGCCTGGATACCATAGCTGCCGCTAAAGCCTTGAGCATCGAGTCTGTGGTCATCTCAAGCTTCGCCTCCTCTGTCACCATCTCCGCCACCACCACCGCTATTTCATGA | 1566 | 44.7 | MIKQILNKLPRKPSSKSSHNDEGNNAMDSASINSSGVGVNNGGSKSNSAKSNNETSKKLGSIGGNQVVQVLNMNHASYEALPSFRVVSSSEKHGLFIKKLNMCCVVFDFSDPSKDSKEKDVKKQTLLELVDYVSSATSKFNEVTMQEMAKMVAANLFRALPNANHDNKLPDLYDQEDDEFSMDPSWPHLQVVYEFLLRFVASSETDAKLAKRYIDHAFVLKLLDLFDSEDQREREYLKTILHRVYGKFMVHRPFIRKAINNIFYLFIFETGKHNGIGELLEILGSIINGFALPLKEEHKQFLVHALIPLHKPRCLSTYHQQLLYCVGQFVEKDFRLADTVIRGLLKYWPVTNSSKEVMYLSELEEILEATQAAEFERCMVPLFRQIGYCLNSSHFQVAERALFLWNNEHIRNLVIQNRKVILPIIFAPLEKNTRGHWNQAVQSLTFNVRKMFSDADESLFQECLVKYQQDEAKEKESLAKRQLTWSRLDTIAAAKALSIESVVISSFASSVTISATTTAIS | 521 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g01539 | 521 | Gene3D | - | 89 | 490 | IPR011989 | - | |
| Ceso2g01539 | 521 | SUPERFAMILY | ARM repeat | 94 | 475 | IPR016024 | - | |
| Ceso2g01539 | 521 | MobiDBLite | consensus disorder prediction | 19 | 60 | - | - | |
| Ceso2g01539 | 521 | PIRSF | PP2A-B56 | 2 | 519 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Ceso2g01539 | 521 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
| Ceso2g01539 | 521 | Pfam | Protein phosphatase 2A regulatory B subunit (B56 family) | 81 | 492 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Ceso2g01539 | 521 | PANTHER | SERINE-THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B | 1 | 496 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Ceso2g01539 | 521 | FunFam | Serine-threonine protein phosphatase 2A regulatory subunit | 88 | 491 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g01539 | K11584 | serine/threonine-protein phosphatase 2A regulatory subunit B' |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 40253 | Ceso2g01539 | Ceso4g01758 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ceso | Ceso-Chr2:32690044 | Ceso4g01758 | Ceso-Chr4:31338924 | dispersed | |
| Ceso | Ceso-Chr2:32690044 | Ceso4g01765 | Ceso-Chr4:31455299 | wgd |