Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g01542 | ATGGATTTTGAATTGAGAAGAGCGAGAGAGAAATTAGAGAAAGAGCAAAAGGATAGAAAAGAGAAGGCTAAGTTGAGATTGGAAAGAGAGAGAAAAGCCAAACAAGAAGCTCTTCGTCACCGTGAGGCCATCGAGGCTGCTCAACGATCTCGTAGGATCGATGCCATGGAAGCCCAACTTAAGGCAGAGCAGCAGATGGAAGAAAATATACTTGCTGGAAGAGGGGTTTCCTTTTATCGTGCTCTAGAAGCTGCGCCTTTTGAGGGTTCTGGAGATAAGATCAAACTTCCGCCTTCCTGTTTCACTGAGTTATCCGAACAAGGTGCCTTCGACAAGGGTCCTCTCCATTTCCAGTTGTCGGTGGTTCGCGAAAATGGATCTTCTTCGGCTGCCGAAAGTGTAGGCCACGGGTCGACCCATGCTGGCGTCTTGGAGTTCACCGCAGAAGAAGGTTCTGTCGGGATCCCTCCTCACATTTGGAACAACTTATACTCGAAACAAGATCCCAAAACTCCGTTAGTCGAAGTACGATACGTGTGGCTGGCAAAAGGAACGTACGCAAAGCTCCAGTCGGAAGAGCTCGGGTTCTCGGACATACCCAACCACAAAGCCGTCCTTGAAACAACCCTTCGCCAGCACGCAACTCTTTCTCAAGACGATGTTTTGACGGTCAAACACGGTGTATTGACTTACCATTTGCGCGTTCTTGAGCTGAAACCGTCGCCAAGCGTATCCGTTCTCGAAACAGATATCGAAGTTGACATCGTGGGTCCTGATTCACTTCCCGAAAGAAGCAACCAGCACGTGCTGAAACCACTAACCTTCGGGAAACCCGAATCGGGAGTTGTAAACGAAAAAGAGTACATTTATTACAAGTTCTCAGTAGATAACGAGACATGGGGAAGAATTTCTTCTGGGGATGCTGAAATTGAAGTAAAACTCGATTCTGAGGCAAAGGATGGAGATACCGATCTCTATCTTTCACAACACCCGCTCTTGTTTCCAAACACCCATCAGCATGGTTGGTCTTCTCATGATATGGGTTCGAAATCTTTGGTTCTTGGCTCCAAAGACCACAGTTTTGGTGCTGGCACTTATAGTGTCGGTGTATATGGGTTCAAAGGAACCACAAAGTATCACGTTTTGGTAACTTTGCAAGATTCTTCTAACATGAAAATGGATCAACAACCTGTGTCATCTTCTTCTTCACAAGGGTCATCAGCAGATACTGTAGAGTGCAGCAATTGCAAGCATTATATACCGTTGAGAACGATAGCACTTCATGAGGCTTACTGTAGAAGACATAATGTCATCTGTCAGCATGCTGGTTGTGGTATCGTTCTCAGGATCGAAGAGGCCAAGAACCATGTGCATTGCGATAAATGTGGACTAGCGTTTCATAGTGACGAGATAGGAAAACATATGAAAGTGTTCCACGAGCCGCTCTGCTGTCCGTGTGGCGCTGTTCTTGAGAAAACACAGATGGTAAGTGACTATGTTTTATTATCTCCTCGTTTGAATGCTTTAAAGAAAACTTCTTTGGGGTTGTTGAGTTCACTCGGGCTGCATTTGGTGCAACACCAGAACTCGGATTGCCCGTTACGTCTTGTTACATGTCGGTTTTGTGGGGACATGGTGGAAGCCGGGTCGTTGGCTGTGGACGCACGTGATCGGTTGAGAGGACTCTCGCAGCACGAAAGTCTTTGTGGGTCAAGAACTGCGCCTTGCGACTCTTGCGGTCGGGCAGTCATGTTGAAAGAAATGGAAATTCATCAAATAGCTGTTCACCAGAAGAACTGA | 1800 | 46.61 | MDFELRRAREKLEKEQKDRKEKAKLRLERERKAKQEALRHREAIEAAQRSRRIDAMEAQLKAEQQMEENILAGRGVSFYRALEAAPFEGSGDKIKLPPSCFTELSEQGAFDKGPLHFQLSVVRENGSSSAAESVGHGSTHAGVLEFTAEEGSVGIPPHIWNNLYSKQDPKTPLVEVRYVWLAKGTYAKLQSEELGFSDIPNHKAVLETTLRQHATLSQDDVLTVKHGVLTYHLRVLELKPSPSVSVLETDIEVDIVGPDSLPERSNQHVLKPLTFGKPESGVVNEKEYIYYKFSVDNETWGRISSGDAEIEVKLDSEAKDGDTDLYLSQHPLLFPNTHQHGWSSHDMGSKSLVLGSKDHSFGAGTYSVGVYGFKGTTKYHVLVTLQDSSNMKMDQQPVSSSSSQGSSADTVECSNCKHYIPLRTIALHEAYCRRHNVICQHAGCGIVLRIEEAKNHVHCDKCGLAFHSDEIGKHMKVFHEPLCCPCGAVLEKTQMVSDYVLLSPRLNALKKTSLGLLSSLGLHLVQHQNSDCPLRLVTCRFCGDMVEAGSLAVDARDRLRGLSQHESLCGSRTAPCDSCGRAVMLKEMEIHQIAVHQKN | 599 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g01542 | 599 | Gene3D | - | 279 | 392 | - | - | |
| Ceso2g01542 | 599 | Gene3D | - | 183 | 256 | - | - | |
| Ceso2g01542 | 599 | Pfam | Ubiquitin fusion degradation protein UFD1 | 90 | 258 | IPR004854 | GO:0006511(InterPro) | |
| Ceso2g01542 | 599 | Coils | Coil | 5 | 66 | - | - | |
| Ceso2g01542 | 599 | Pfam | TRAFD1-XAF1, zinc finger | 562 | 591 | IPR049439 | - | |
| Ceso2g01542 | 599 | Gene3D | Zinc-RING finger domain, C3HC4 (zinc finger) | 527 | 597 | IPR013083 | - | |
| Ceso2g01542 | 599 | Gene3D | - | 63 | 181 | IPR042299 | - | |
| Ceso2g01542 | 599 | PANTHER | UBIQUITIN FUSION DEGRADATON PROTEIN 1 | 1 | 570 | IPR004854 | GO:0006511(InterPro)|GO:0030433(PANTHER)|GO:0031593(PANTHER)|GO:0034098(PANTHER)|GO:0071712(PANTHER) | |
| Ceso2g01542 | 599 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g01542 | K14016 | ubiquitin fusion degradation protein 1 |