Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g01546 | ATGACGGTGAAGAAGAGATCTGTAGCTTCTTCTGCTGCTGCTTCTAGACGCCAAATTCCGGCTTTTGTTTCTAAGTTTGTCATCTCGTTGTTGATAATATTTTGTTTTGTTGCCTTTTGCGGACTCTTCTCTCAATTTAAGCTTCAATCGTCATCCCTTCCAACTGGATTTTATTTTGATGACTTTCGTCTCCATGATTATTATAATCCTGTGAAGAAGATCGCTTTCCTTTTTCTTGTGAGAGATAATCTTCCTCTTGATTTCCTTTGGCACAACTTCTTTAAGAATGCAGATCCTGAGAATTTCACGATTTACATACACTCGAAGCCTGGTTTTGTGTTTGATGAGTCGGTTACCAGATCAGTCTTTTTCTACAACCGACAGTTGGAAAACAGTGTGGAGGTGGGTTGGGGTAAGCCAACCATGATTGAAGCAGAGAAACTGCTGTTCAAGGCCGCCCTTGATGATCCAAGCAATCAGATATTTGTTCTCCTGTCTGACAGCTGTGTACCACTATACGATTTCAGTCACATATACACATATCTCATGTCCTCTCCAAGAAGCTTCGTGGATGGCTTCATTGATTTCAAGGAAAATCGCTATAATCCGGAGATGTCCCCTGACATACCTGAAGACAAATGGCGGAAAGGATCCCAGTGGATCACATTGGCTAGAAAACATGCGGAGATGGTTGCATACGATCATGTTGTTTTCCCAATCTTTGAGAAACACTGCAAGCGGCGACCTCTTCTAGACTTGAGCAGGGGAAACGAGTCTCTTAAAGAACAGCAGCAACACAATTGCATTCCAGATGAACATTATGTTCCTACCTTACTTTCTATGCGGGGTGTTGAAGATGAATTGGAGCGAAGGACGTTAACTTATTCTTTATGGAACCAGTCTACAGAAACGATGAATACACAAGCCTGGCATCCTGTAACATTTGGCTATGCAAGTGCCAGCCAGAAACATATTCAAGATATCAAGGATATCGACCATATTTATTTCGAGTCTGAGAACCGGACCGAATGGTGTGGTACTAAATCTAGTAGCGGTTCTTGTTATTTATTTGCGAGGAAGTTCTCGCGTGGTGCAGCTATGCGACTTCTGACCAATGGGGTGGTTGGTCCGTATGATCCTAACACGATGTTCCAAGACCTCACATAG | 1167 | 42.67 | MTVKKRSVASSAAASRRQIPAFVSKFVISLLIIFCFVAFCGLFSQFKLQSSSLPTGFYFDDFRLHDYYNPVKKIAFLFLVRDNLPLDFLWHNFFKNADPENFTIYIHSKPGFVFDESVTRSVFFYNRQLENSVEVGWGKPTMIEAEKLLFKAALDDPSNQIFVLLSDSCVPLYDFSHIYTYLMSSPRSFVDGFIDFKENRYNPEMSPDIPEDKWRKGSQWITLARKHAEMVAYDHVVFPIFEKHCKRRPLLDLSRGNESLKEQQQHNCIPDEHYVPTLLSMRGVEDELERRTLTYSLWNQSTETMNTQAWHPVTFGYASASQKHIQDIKDIDHIYFESENRTEWCGTKSSSGSCYLFARKFSRGAAMRLLTNGVVGPYDPNTMFQDLT | 388 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g01546 | 388 | Pfam | Core-2-I-Branching enzyme | 74 | 328 | IPR003406 | GO:0016020(InterPro)|GO:0016757(InterPro) | |
| Ceso2g01546 | 388 | PANTHER | CORE-2-I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED | 69 | 370 | IPR044174 | GO:0016757(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g01546 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ceso | Ceso-Chr1:797518 | Ceso2g01546 | Ceso-Chr2:32827793 | dispersed | |
| Ceso | Ceso-Chr1:54196101 | Ceso2g01546 | Ceso-Chr2:32827793 | dispersed | |
| Ceso | Ceso-Chr2:32827793 | Ceso4g02450 | Ceso-Chr4:47747046 | dispersed | |
| Ceso | Ceso-Chr2:32827793 | Ceso1g02276 | Ceso-Chr1:54145535 | transposed |