AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g01547 ATGGCTGAAACCCTAAGCCCTACTTCTACACAGATACAGAGAGCGCAGGTCCTCTCTCCGGACCGACCTTTGTTTTTGGGCTCCAACGATGACAAGCTCGAGCGTGCCCAAGCGCGTGCCGCCCGTGCTGCAGCCATCCGTCGGAAGCCGGTCGCTATTCCTCAAGCGAGCGACGTCAGTGCTTCCGAACCGTGTCTAGGGCAGGATCAGATTATGGAATTGTTCCAGAATTGCATCAAACTTGCAAGTGAAAATAAAATTAATCAGAAGAACACTTGGGAGCTGAATCTCATAGATCACCTTTGCGATATTATTAAGGTCGAAGAAGAGAATGACGTCGAGACCAATTTTCAGAAGGCAAGCTGCACTCTTGAAGCTGGAGTTAGAATATACTCGATGAGGGTGGATTCGGTCCATTCTGAGGCATATAAAGTTCTTGGAGGGATTAGTCGAGTTTCTCAGGAACCTGAACAAGACAGTGTAGAGGATGGCGACATGGACATGCAAGGAGAAGGCGATTCAAAGAAGGAGAAGGAACTAAAGTTATCTCCTTTAACAACATTGGAATCATCCTTTGAGTCTCTCAATGTGAAGAAGTTTGATGTTGCATTTGCTGTGGATCCTCTCTATCATCAGACAACTGCCCAGTTTGATGAAGGTGGATCAAAAGGTCTCTTGCTGAATAACCTTGGAGTATACGGTGGATGCCGAATGGTTTTTGATTCACTTGAAGTACCTGGGAAGTGCATGTCAAGCTCAAGTGACCATGATAAAACAGATACAATTGATATCTCTTATGCTAGAGATCATATAGAACAAATGGTATCAAACATCTCAAAGAAACATGAAATCTCTCCAAGTCTCAAGGATATAGTTAATATGTTCGGTGAAGATAATAGAAGACCACCGGATACCTTTTCTTCTTCCCAAAAGTCCGTAGAACCAGATCATGAAGCTTACGGCGATGACTTTGATGGTGGTGCACATGACTGTTCAGGAACGTGGGACTTTGTTAATGACAACCAGACAAGCGTCAATGGTGATGACACCTATGAAGGAGATGAGGGACTCTTTGTACCAGTTTATCATGAGGAAAACGAACCAGATGTTTTTCATGATGGTGATGTAGATAACGGATTTGCGAAAGTTGACAGTTTCTTGTTTCTAAGTATTGGTTTAACGGGAAAACAAAATGCATGGGCAGGCCCTGATCATTGGAAGTATCGAAAGACTAAAGGTCTAGAAGACCCTGCAAAGGAAAATGGGTCACCGTTAAAACCGAAAAAACAAAGGAATAAGAAACAAGGTGAAGTTGATATAGAATTTACGAAAGCATTGGACTTGGTCGGTGACATGAATGATATCTTTGGTCTTCCTAAATACCCCAAGTCGCTATTGTTGCCTGCAAATAAAGAGCCATGTAACACAACACTTCCGGAAGATTGCCACTATCAACCAGAGGATCTTGTCAAGCTATTTCTTCTTCCTAATGTTATGTGTCTTGGAAGGAGAGGAAGGAGACATTCAGATGAACCTGGTCAAGAAGGAGAAGAGAATAATGGGACGTTTTCGTCTTGGGAGGATGACTGTGGCCATTTTGACGATGGAAATGCTTATGATGATGTTGAGGATTCTATCGCACTTGTGTCTCAGCCCCGTCAGGTAAATAAGATAGAAGTTGAGTATGACAAAACATCTAAACAAGTTGATGTTCAAGCACTTAAAGAGACTCTTTGGTCATCTATGCAAGAAACACATGGATCAACTCAGGAGACAAAGACCTTGTCTTTTCAACATTTATTGTCATCTTTTCCAACGGATAACAAGAAAACGAAAGCTGCACCCATCGATGTTATCTCCCCGCACTTGTGTTTCATTTGTGTGTTGCATTTGGCTAATGAGCATGGATTGAGCATCCATGGCTGTGCCAACTTGGATGACCTCACCATACATCTTCCATTTTGA 1965 42.75 MAETLSPTSTQIQRAQVLSPDRPLFLGSNDDKLERAQARAARAAAIRRKPVAIPQASDVSASEPCLGQDQIMELFQNCIKLASENKINQKNTWELNLIDHLCDIIKVEEENDVETNFQKASCTLEAGVRIYSMRVDSVHSEAYKVLGGISRVSQEPEQDSVEDGDMDMQGEGDSKKEKELKLSPLTTLESSFESLNVKKFDVAFAVDPLYHQTTAQFDEGGSKGLLLNNLGVYGGCRMVFDSLEVPGKCMSSSSDHDKTDTIDISYARDHIEQMVSNISKKHEISPSLKDIVNMFGEDNRRPPDTFSSSQKSVEPDHEAYGDDFDGGAHDCSGTWDFVNDNQTSVNGDDTYEGDEGLFVPVYHEENEPDVFHDGDVDNGFAKVDSFLFLSIGLTGKQNAWAGPDHWKYRKTKGLEDPAKENGSPLKPKKQRNKKQGEVDIEFTKALDLVGDMNDIFGLPKYPKSLLLPANKEPCNTTLPEDCHYQPEDLVKLFLLPNVMCLGRRGRRHSDEPGQEGEENNGTFSSWEDDCGHFDDGNAYDDVEDSIALVSQPRQVNKIEVEYDKTSKQVDVQALKETLWSSMQETHGSTQETKTLSFQHLLSSFPTDNKKTKAAPIDVISPHLCFICVLHLANEHGLSIHGCANLDDLTIHLPF 654
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g01547 654 MobiDBLite consensus disorder prediction 153 180 - -
Ceso2g01547 654 MobiDBLite consensus disorder prediction 414 436 - -
Ceso2g01547 654 MobiDBLite consensus disorder prediction 299 325 - -
Ceso2g01547 654 Pfam Condensin complex subunit 2 22 511 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Ceso2g01547 654 Pfam Condensin complex subunit 2 540 650 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Ceso2g01547 654 PIRSF Condensin-H 3 547 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Ceso2g01547 654 PIRSF Condensin-H 527 653 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Ceso2g01547 654 MobiDBLite consensus disorder prediction 504 527 - -
Ceso2g01547 654 PANTHER CONDENSIN COMPLEX SUBUNIT 2 14 652 IPR022816 GO:0000796(InterPro)|GO:0000799(PANTHER)|GO:0003682(PANTHER)|GO:0007076(PANTHER)|GO:0007076(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g01547 K06676 condensin complex subunit 2
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Event-related genes

Select Gene_1 Gene_2 Event_name
40254 Ceso2g01547 Ceso4g01766
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:32839913 Ceso4g01766 Ceso-Chr4:31482273 wgd