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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g01555 ATGGCATTAAACAGAGGTGGATCCTGTAATCCGGCCGCCGTGAAGGTCGGAATTACATTCTTAGGACTATGTTTGGTGGGTTATCTACTAGGTCCGCCGCTATACTGGCATTTTCTTGAAGGTTTAGCCGCCGTCCGCCACTCCTCCGCCGCCGGTTCTTGCCCACCCTGCAACTGCGACTGCGATTCTCAGCCCCTCCTCTCAATCCCTCAAGGGCTAAGCAATAATTCATTTACAGCAGATTGTGCAAAGCACGATCCTGAAGTGAGCGGAGACACGGAAAAGAATTTCGCGGAGCTTTTATCGGAGGAATTGAAGCTACGTGAAGCGGAAGCTTTAGAAAGTCAGCAGCGTGCTGACATGGCGCTCCTCGAGGCCAAGAAGTTGACATCCCAGTATCAGAAAGAAGCGGACAAATGCAATTCGGGAATGGAGACTTGTGAAGAAGCTCGTGAAAAAGCCGAAGCAGCCTTAGTAGCACAGAAACAACAAAGCGAAATGTGGGAATTACGAGCCCGACAAAGAGGCTGGAAGGACGGCAGCGGCAAGTCTGTAAACGCCATATGA 567 50.79 MALNRGGSCNPAAVKVGITFLGLCLVGYLLGPPLYWHFLEGLAAVRHSSAAGSCPPCNCDCDSQPLLSIPQGLSNNSFTADCAKHDPEVSGDTEKNFAELLSEELKLREAEALESQQRADMALLEAKKLTSQYQKEADKCNSGMETCEEAREKAEAALVAQKQQSEMWELRARQRGWKDGSGKSVNAI 188
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g01555 188 Coils Coil 107 127 - -
Ceso2g01555 188 Pfam Protein of unknown function (DUF1068) 12 179 IPR010471 -
Ceso2g01555 188 Coils Coil 144 164 - -
Ceso2g01555 188 PANTHER EXPRESSED PROTEIN 1 184 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g01555 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
40255 Ceso2g01555 Ceso4g01767
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:33002567 Ceso5g02347 Ceso-Chr5:55687155 dispersed
Ceso Ceso-Chr2:33002567 Ceso4g01767 Ceso-Chr4:31494701 wgd