Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g01568 | ATGAACCAATGGCATATGAAGACATCATTCGTGCTCTTCCTATTGATAGCAATCGCAGATACTATTAATGGAGAAGATCCTTATAGATTCTTCAACTGGAATGTCACTTATGGTGATATCTATCCTCTTGGAGTTAAACAGCAGGGGATATTGATTAACGGCCAGTTTCCGGGTCCGCAAATCGATTGTGTGACGAATGATAATGTGATTGTTAGTGTTTTCAATAGCTTGGATGAACCTTTCCTCATTACCTGGAATGGGATACAGCAGAGGAGGAATTCATGGCAGGATGGAGTTTATGGCACAAATTGCCCTATTCCACCTGGTCAGAATTTCACCTACATTCTTCAAGTCAAGGATCAAATTGGTAGTTTCTTCTACTTCCCCTCCCTTGCTTTTCATAAAGCCGCCGGAGGATTTGGCGCCATCACCGTTTCTAGCCGTCCGAGGATTCCGGTACCTTTCCCGCCACCGGCGGCGGATTACTCCATTCTTGCCGGAGATTGGTTCAAGCAAAACCACACTGATCTGAAAGCAATTCTAGACGGAGGCCATGATCTTCCTTTCCCCGATGGTCTTCTCATCAACGGGCGTGGATCAAACGGTTTTACATACAACGTTGATCAAGGGAAAACTTATCGGTTGAGGATTTCGAACGTGGGGCTGACTACATCGATTAACTTTAGGATCCAAGGGCATAAAATGCTGTTAGTTGAGGTGGAAGGAACACATAGTCTTCAAAACACATATTCTTCTCTTGATATCCATTTGGGTCAATCTTACTCCGTCTTGATCACCGCCGATCAACCGCCTCAAGATTACTACATGGTGGTGTCCACCAGATTCACCTCGCAAATCCTCACCGCAACCTCCATTCTTCATTACAGCAACTCTCCCGGAACTTTCCCGGCTCCCCCTCCCGGTGGTCCCACCATCCAAATTGACTGGTCTTTAAATCAAGCACGCTCCATAAGGCTGTTTCGTGGGACCCATGAGTCCATAAGTAGTATTCATATGGTAGATAACATGGAAGCTAATGGGTTGGATTTGAACAGGCAAAACTTAACGGCAAGTGGTCCGAGGCCGAACCCACAAGGTTCGTACCATTACGGGATGGTCAATTTCACCCGGACCATCAGGCTGGCTAACTCTGCTCCGGTTATAAATGGCAAGCAGAGGTATGCTGTGAACAGCGTGTCCTTTATACCGGCGGACACCCCTCTGAAGATTGCTGATTATTTCCAGATCTCCGGTGTCTTTTCCCTCGGAACCATTTCCGAAAGCCCCACGGGCGGTGGTGGTTACCTCCAGACTTCAGTCATGGCGGCTGATTTCAGAGCGTTTGCTGAGATTGTGTTCGAGAACTCGGAAGACACCGTACAGTCATGGCATATGGATGGCCATATCTTCTTTGTCGTAGGGATGGATGGAGGGCAATGGTCTCCTTCAAGCAGAACAAGTTACAATTTAAGAGATGGGATTTCGCGCTCTACAGTTCAGGTATATCCGCACTCGTGGACTGCGTTATACGTGCCATTGGATAATGTAGGAATGTGGAACATAAGGTCTCAGAACTGGGTTCGACAATACTTAGGTCAACAGTTTTATCTTAGAGTTTATTCACCTGCGAATTCGTGGAGAGACGAATACCCAATCCCCAAGAATGCAATTACTTGTGGGCGAGCAAGCGGTCGCAAGACTCGTCCTCTATGA | 1713 | 46.88 | MNQWHMKTSFVLFLLIAIADTINGEDPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPQIDCVTNDNVIVSVFNSLDEPFLITWNGIQQRRNSWQDGVYGTNCPIPPGQNFTYILQVKDQIGSFFYFPSLAFHKAAGGFGAITVSSRPRIPVPFPPPAADYSILAGDWFKQNHTDLKAILDGGHDLPFPDGLLINGRGSNGFTYNVDQGKTYRLRISNVGLTTSINFRIQGHKMLLVEVEGTHSLQNTYSSLDIHLGQSYSVLITADQPPQDYYMVVSTRFTSQILTATSILHYSNSPGTFPAPPPGGPTIQIDWSLNQARSIRLFRGTHESISSIHMVDNMEANGLDLNRQNLTASGPRPNPQGSYHYGMVNFTRTIRLANSAPVINGKQRYAVNSVSFIPADTPLKIADYFQISGVFSLGTISESPTGGGGYLQTSVMAADFRAFAEIVFENSEDTVQSWHMDGHIFFVVGMDGGQWSPSSRTSYNLRDGISRSTVQVYPHSWTALYVPLDNVGMWNIRSQNWVRQYLGQQFYLRVYSPANSWRDEYPIPKNAITCGRASGRKTRPL | 570 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g01568 | 570 | SUPERFAMILY | Cupredoxins | 24 | 175 | IPR008972 | - | |
| Ceso2g01568 | 570 | SUPERFAMILY | Cupredoxins | 155 | 314 | IPR008972 | - | |
| Ceso2g01568 | 570 | FunFam | Monocopper oxidase-like protein | 372 | 569 | - | - | |
| Ceso2g01568 | 570 | Pfam | Multicopper oxidase | 161 | 298 | IPR001117 | - | |
| Ceso2g01568 | 570 | Gene3D | - | 159 | 326 | IPR008972 | - | |
| Ceso2g01568 | 570 | PANTHER | MULTI-COPPER OXIDASE | 29 | 536 | IPR045087 | GO:0016491(PANTHER) | |
| Ceso2g01568 | 570 | SUPERFAMILY | Cupredoxins | 372 | 561 | IPR008972 | - | |
| Ceso2g01568 | 570 | CDD | CuRO-1-AAO-like-1 | 30 | 145 | IPR034273 | GO:0005507(InterPro) | |
| Ceso2g01568 | 570 | Gene3D | - | 28 | 149 | IPR008972 | - | |
| Ceso2g01568 | 570 | Pfam | Multicopper oxidase | 34 | 148 | IPR011707 | GO:0005507(InterPro) | |
| Ceso2g01568 | 570 | Pfam | Multicopper oxidase | 405 | 542 | IPR011706 | GO:0005507(InterPro)|GO:0016491(InterPro) | |
| Ceso2g01568 | 570 | Gene3D | - | 371 | 567 | IPR008972 | - | |
| Ceso2g01568 | 570 | FunFam | Monocopper oxidase-like protein | 159 | 331 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g01568 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 40259 | Ceso2g01568 | Ceso4g01810 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ceso | Ceso-Chr2:33322862 | Ceso4g03896 | Ceso-Chr4:87597268 | dispersed | |
| Ceso | Ceso-Chr1:53471221 | Ceso2g01568 | Ceso-Chr2:33322862 | transposed | |
| Ceso | Ceso-Chr2:33322862 | Ceso4g01810 | Ceso-Chr4:32472164 | wgd |