AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g01568 ATGAACCAATGGCATATGAAGACATCATTCGTGCTCTTCCTATTGATAGCAATCGCAGATACTATTAATGGAGAAGATCCTTATAGATTCTTCAACTGGAATGTCACTTATGGTGATATCTATCCTCTTGGAGTTAAACAGCAGGGGATATTGATTAACGGCCAGTTTCCGGGTCCGCAAATCGATTGTGTGACGAATGATAATGTGATTGTTAGTGTTTTCAATAGCTTGGATGAACCTTTCCTCATTACCTGGAATGGGATACAGCAGAGGAGGAATTCATGGCAGGATGGAGTTTATGGCACAAATTGCCCTATTCCACCTGGTCAGAATTTCACCTACATTCTTCAAGTCAAGGATCAAATTGGTAGTTTCTTCTACTTCCCCTCCCTTGCTTTTCATAAAGCCGCCGGAGGATTTGGCGCCATCACCGTTTCTAGCCGTCCGAGGATTCCGGTACCTTTCCCGCCACCGGCGGCGGATTACTCCATTCTTGCCGGAGATTGGTTCAAGCAAAACCACACTGATCTGAAAGCAATTCTAGACGGAGGCCATGATCTTCCTTTCCCCGATGGTCTTCTCATCAACGGGCGTGGATCAAACGGTTTTACATACAACGTTGATCAAGGGAAAACTTATCGGTTGAGGATTTCGAACGTGGGGCTGACTACATCGATTAACTTTAGGATCCAAGGGCATAAAATGCTGTTAGTTGAGGTGGAAGGAACACATAGTCTTCAAAACACATATTCTTCTCTTGATATCCATTTGGGTCAATCTTACTCCGTCTTGATCACCGCCGATCAACCGCCTCAAGATTACTACATGGTGGTGTCCACCAGATTCACCTCGCAAATCCTCACCGCAACCTCCATTCTTCATTACAGCAACTCTCCCGGAACTTTCCCGGCTCCCCCTCCCGGTGGTCCCACCATCCAAATTGACTGGTCTTTAAATCAAGCACGCTCCATAAGGCTGTTTCGTGGGACCCATGAGTCCATAAGTAGTATTCATATGGTAGATAACATGGAAGCTAATGGGTTGGATTTGAACAGGCAAAACTTAACGGCAAGTGGTCCGAGGCCGAACCCACAAGGTTCGTACCATTACGGGATGGTCAATTTCACCCGGACCATCAGGCTGGCTAACTCTGCTCCGGTTATAAATGGCAAGCAGAGGTATGCTGTGAACAGCGTGTCCTTTATACCGGCGGACACCCCTCTGAAGATTGCTGATTATTTCCAGATCTCCGGTGTCTTTTCCCTCGGAACCATTTCCGAAAGCCCCACGGGCGGTGGTGGTTACCTCCAGACTTCAGTCATGGCGGCTGATTTCAGAGCGTTTGCTGAGATTGTGTTCGAGAACTCGGAAGACACCGTACAGTCATGGCATATGGATGGCCATATCTTCTTTGTCGTAGGGATGGATGGAGGGCAATGGTCTCCTTCAAGCAGAACAAGTTACAATTTAAGAGATGGGATTTCGCGCTCTACAGTTCAGGTATATCCGCACTCGTGGACTGCGTTATACGTGCCATTGGATAATGTAGGAATGTGGAACATAAGGTCTCAGAACTGGGTTCGACAATACTTAGGTCAACAGTTTTATCTTAGAGTTTATTCACCTGCGAATTCGTGGAGAGACGAATACCCAATCCCCAAGAATGCAATTACTTGTGGGCGAGCAAGCGGTCGCAAGACTCGTCCTCTATGA 1713 46.88 MNQWHMKTSFVLFLLIAIADTINGEDPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPQIDCVTNDNVIVSVFNSLDEPFLITWNGIQQRRNSWQDGVYGTNCPIPPGQNFTYILQVKDQIGSFFYFPSLAFHKAAGGFGAITVSSRPRIPVPFPPPAADYSILAGDWFKQNHTDLKAILDGGHDLPFPDGLLINGRGSNGFTYNVDQGKTYRLRISNVGLTTSINFRIQGHKMLLVEVEGTHSLQNTYSSLDIHLGQSYSVLITADQPPQDYYMVVSTRFTSQILTATSILHYSNSPGTFPAPPPGGPTIQIDWSLNQARSIRLFRGTHESISSIHMVDNMEANGLDLNRQNLTASGPRPNPQGSYHYGMVNFTRTIRLANSAPVINGKQRYAVNSVSFIPADTPLKIADYFQISGVFSLGTISESPTGGGGYLQTSVMAADFRAFAEIVFENSEDTVQSWHMDGHIFFVVGMDGGQWSPSSRTSYNLRDGISRSTVQVYPHSWTALYVPLDNVGMWNIRSQNWVRQYLGQQFYLRVYSPANSWRDEYPIPKNAITCGRASGRKTRPL 570
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g01568 570 SUPERFAMILY Cupredoxins 24 175 IPR008972 -
Ceso2g01568 570 SUPERFAMILY Cupredoxins 155 314 IPR008972 -
Ceso2g01568 570 FunFam Monocopper oxidase-like protein 372 569 - -
Ceso2g01568 570 Pfam Multicopper oxidase 161 298 IPR001117 -
Ceso2g01568 570 Gene3D - 159 326 IPR008972 -
Ceso2g01568 570 PANTHER MULTI-COPPER OXIDASE 29 536 IPR045087 GO:0016491(PANTHER)
Ceso2g01568 570 SUPERFAMILY Cupredoxins 372 561 IPR008972 -
Ceso2g01568 570 CDD CuRO-1-AAO-like-1 30 145 IPR034273 GO:0005507(InterPro)
Ceso2g01568 570 Gene3D - 28 149 IPR008972 -
Ceso2g01568 570 Pfam Multicopper oxidase 34 148 IPR011707 GO:0005507(InterPro)
Ceso2g01568 570 Pfam Multicopper oxidase 405 542 IPR011706 GO:0005507(InterPro)|GO:0016491(InterPro)
Ceso2g01568 570 Gene3D - 371 567 IPR008972 -
Ceso2g01568 570 FunFam Monocopper oxidase-like protein 159 331 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g01568 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
40259 Ceso2g01568 Ceso4g01810
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:33322862 Ceso4g03896 Ceso-Chr4:87597268 dispersed
Ceso Ceso-Chr1:53471221 Ceso2g01568 Ceso-Chr2:33322862 transposed
Ceso Ceso-Chr2:33322862 Ceso4g01810 Ceso-Chr4:32472164 wgd