AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g01575 ATGGTGGCTTGTCAAATTCTTCAATTCACATGGCTGCTTCTTCTTCTTCTTCTCCGTATATCAGAATCAGATAGCAGGGCTTTCCAGATAGTACAATTAAACATGAAAGAAGCTGAATCACCTGGTGCTCCTTTGGATCCTCTTCCATTACTTGCCCCTTCACCTTTGATCATGCCATTCACCAACCTTACCCTCCCAAATTTGGGTTCCACTTCCAAATATCTCAATTGTTATAACCTTTCAGGAAAATGTCCCCTGAACTTTTCAAATGCTGAAAATGTGCTAGCCACAACAGCAATTGATTGCTGGAGCTCATTAGCTCCATATCTAGCCAATGCCGTTTGTTGTCCTCAGCTATATGCCGCGATCACGATCCTCATCGGCCAATCTAGTTTCTCTTCCGGGGATCTCGGGGTTAGCCCTGCTCACGCCAACCACTGCCTCTCCGATATCGCACAAATCTTAGAAGCTCGAGGTTCCAATAACGACCTTCTCAACATATGCTCAATAAACCCATCCGAGCTCACCCAATCTTCTTGCCCTTTGGCTCGTGTTTCCGATATCGAAAACGCTCTCAACATTTCCAAGATTCTTGGATCGTGCGAAAAGATCGATCCCGTGAAAGAGTGCCGTTATAAAGTCTGTCAGAGCGCGATTATGGATGCTGCTGTGAAGATTGCTTCGACGAATTACAGTGTGGAGGGTGTGGTTGGAGGTGATCCTGTGTCGCGTGTTCGTGTGGCCGTGGTTGATGATTGTAGGAAGATTGTGCTTCGATGGATGGTGAGTAGACTCGATCCTGCTCGTGGAAATAAAGTTTTACGAGGGATTTCTAGTTGCAAGATCAACAAAGTTTGTCCGCTTGTGTTTCCCGACCTGAAAAAAGTTACAAAGGAATGTGGAGATACGATTAGTAATAAGAGCGCTTGTTGCGATGCTATGGAGAACTACATTAAGCTATTGCAAGTACAAAGCTTCGTTACGAACTTGCAAGCCTTCAATTGTGCTTCTACCCTTGCTGCAAATTTGCGAAAAGCTAACGTCTCTAGCAACGTGTACAACATTTGTGGCATAAAACTAAAAGATTTCTCTCTACAAGACTCTGGCTGCCTCTTCCCAAGCTTGCCCTTTGACGTCACATATGATCAAAGTTCAGGAATCGAGTTCAAATGTGACCTTAATGACAACGTTGCAGCGCCATGGCCTTCTTCATACGCTTATTCTCCATCTCCGTCATCTAATATAAGTGTATCTGGCACAGATCTTCCACCACTTCCCAAAGCAGCATCTGATCAGAGTGGTGAGCTTTTTTCTTCATTATTGATGAGCTAA 1332 44.44 MVACQILQFTWLLLLLLLRISESDSRAFQIVQLNMKEAESPGAPLDPLPLLAPSPLIMPFTNLTLPNLGSTSKYLNCYNLSGKCPLNFSNAENVLATTAIDCWSSLAPYLANAVCCPQLYAAITILIGQSSFSSGDLGVSPAHANHCLSDIAQILEARGSNNDLLNICSINPSELTQSSCPLARVSDIENALNISKILGSCEKIDPVKECRYKVCQSAIMDAAVKIASTNYSVEGVVGGDPVSRVRVAVVDDCRKIVLRWMVSRLDPARGNKVLRGISSCKINKVCPLVFPDLKKVTKECGDTISNKSACCDAMENYIKLLQVQSFVTNLQAFNCASTLAANLRKANVSSNVYNICGIKLKDFSLQDSGCLFPSLPFDVTYDQSSGIEFKCDLNDNVAAPWPSSYAYSPSPSSNISVSGTDLPPLPKAASDQSGELFSSLLMS 443
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g01575 443 Pfam SPARK 81 227 IPR043891 -
Ceso2g01575 443 PANTHER GPI-ANCHORED PROTEIN 40 434 IPR040336 GO:0005886(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g01575 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:33589582 Ceso2g03615 Ceso-Chr2:89012108 dispersed