Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g01580 | ATGAGCCAGATTACCAAAAAAATATGGGGATTAAACCTCAAGAGAACGATCATCTGGCGTGTAGCTTTTCTCCGGCGATGTGCACGATCTCTTTGGCACCAAATTCTTGCTTGTTTGATCGGAAAAACTCTCCGATATCGTCATTTGTTAAGTTCCGGTTCCGGTTCCGGCCCTTTGATACCGACTTCTCTTCGTCGGCCGGAAATGATGATGACACCCTCTACCACCGGCGAAATGACGTCATCCTCCGATGATGGTTCCGATTTGGTGGCTTTGAAGATTAGTTTGTTGGGTGATCAGCATATTGGCAAAACAAGCTTCTTGGCAAAGTATGTTGGGAAAGAGAAGAATGAAGAAGAATTAGAAGGCAGAGGAATAAATCAAATGGATAAAACACTTTGTGTTAGAGGAGCCAGGATCGCCTACAGTATCTGGGAAGTCGGTGGTGATGCATTTTATCCAGATGGTGATTTGAAGACTTCGATTCCAGCCGCTTGTAAAGACTCTGTTGCTATACTATTCATGTTCGATTTAACGAGTCGATGTACACTTAACAGTGTCATCAATTGGCACCAGCAAGCCAGGTATCATAATCAGATGGCAATTCCGGTGATGGTCGGGAGCAAGTTTGACGAATTCGTTCAGCTTCCGTTAGATTTACAATGGACGATCGCAAACCAGGCTAGAGCATACGCAAAGGCCATAAACGCAACCTTGTTCTTCTCGAGTGCATCTTACAACATAAATGTAAATAAAATCTTCAAGTTCGTAACTGCAAAGCTCTTTGACTTGCCTTGGGTTTTGGAGCGTAACCTTACAATTGGTGAGCCTATTATCGATTTTTGA | 846 | 43.38 | MSQITKKIWGLNLKRTIIWRVAFLRRCARSLWHQILACLIGKTLRYRHLLSSGSGSGPLIPTSLRRPEMMMTPSTTGEMTSSSDDGSDLVALKISLLGDQHIGKTSFLAKYVGKEKNEEELEGRGINQMDKTLCVRGARIAYSIWEVGGDAFYPDGDLKTSIPAACKDSVAILFMFDLTSRCTLNSVINWHQQARYHNQMAIPVMVGSKFDEFVQLPLDLQWTIANQARAYAKAINATLFFSSASYNINVNKIFKFVTAKLFDLPWVLERNLTIGEPIIDF | 281 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g01580 | 281 | Gene3D | - | 80 | 268 | IPR027417 | - | |
| Ceso2g01580 | 281 | Pfam | Ras family | 93 | 260 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Ceso2g01580 | 281 | PRINTS | Transforming protein P21 ras signature | 92 | 113 | - | - | |
| Ceso2g01580 | 281 | PRINTS | Transforming protein P21 ras signature | 239 | 261 | - | - | |
| Ceso2g01580 | 281 | PRINTS | Transforming protein P21 ras signature | 199 | 212 | - | - | |
| Ceso2g01580 | 281 | PRINTS | Transforming protein P21 ras signature | 133 | 155 | - | - | |
| Ceso2g01580 | 281 | FunFam | Septum-promoting GTP-binding protein 1 | 82 | 271 | - | - | |
| Ceso2g01580 | 281 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 92 | 273 | IPR027417 | - | |
| Ceso2g01580 | 281 | PANTHER | - | 90 | 280 | - | GO:0003924(PANTHER)|GO:0005525(PANTHER) | |
| Ceso2g01580 | 281 | ProSiteProfiles | small GTPase Rab1 family profile. | 82 | 281 | - | - | |
| Ceso2g01580 | 281 | SMART | rab-sub-5 | 92 | 264 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g01580 | K07976 | Rab family, other |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ceso | Ceso-Chr1:101785566 | Ceso2g01580 | Ceso-Chr2:33656631 | dispersed | |
| Ceso | Ceso-Chr2:33656631 | Ceso4g01895 | Ceso-Chr4:34366408 | dispersed | |
| Ceso | Ceso-Chr2:33656631 | Ceso2g02244 | Ceso-Chr2:55550125 | transposed |