Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g01608 | ATGGGGTCTGCATGTTGTGTTGCTGCTAGGGATAGAACCATTACAGATCAATCCGTTAGTGATGTTATGCCAAGGAATGATCGGTATTCGCCGTCGTGGAGTTTTCGCTGGGATAACCGAGGGCGCGTAGCAGGTGAAGAGTCGTCCATGAATTGCTTTTCAGATGGTGCTGGTATGAATAATAGGTTGGACAATAAATCTCATACAACTGTAGGAACTGCTCATGCAACAGAAGAAGGCAGTCCATTAGACAGTTCTAGAAGTCTTACCTGGCAGAAGTCGCCACCTTCTGAAGAAAATGGAGCTCCTCAGTCAGTATGGAGTGAGCCTTTCTTTAACAACTCCTTTCGTCTAAATGTTAGAGATCATGAGATATTCTCAAATGGCAGCGAATCTTTTGAGCTATGGCTTGAAAGACTCAAGTATAAAGTGCAGCCTTTTATGTTTGGAAAGTTCTATCTCAGGTATCAAATCAGAGATCCACCTATTTTGAATATACTTCCAGCTATAAAACAGCTACAACGCATCAGTTTAGGTGTGATTAAGACAGATGAAAGAGCAACCAAGTTTAATGACCCAAGTTCACAATTTCATGGGAACTTACAACTCTTTACTGCTAAGCACTTGTCCTGGTGTATGCTGCTTTCTGCAGTAATCTGTACAGCATTTGCTTCTGCGTCATCTATATATCCATTGAACTCTAAGAATCTTCCCGAGGGGAAGGAGACAAGGAGAACTCAGGTAGCTTTGGAACTGTCTCCAACCAAAATTTTAACTCCAACGCATTCGGTTTCATCCTTTTCGGCGTCTCCTTTGTCTTCTTCCCAAGGACATCTTATGCCCCTAACAAGCTTGACCCCATCAAGGTGGCCTCGCCGTTCCCCAGGACACCATCTACTACGTCAAGTATCAGATAGCCGAATCCGTGGCATAATGTCACCTAATTTTTCGATATCGGAGGAGGGTTCTCCTTTTATGCACCCTGGGTGGAGCAATAAATCACACAGGGGTTCTCATGGTGGATCTTCAGATGGTTGGTCTATACCTGCCTTTCCTGAGCTCGCGACAACTTCTAACAGAGACAGATGGTCTTTCGATAGCGATTCTCTCAGTTTTAGTCGTGATAGGATTAGCAGATCAAGTGGCCGGGTTTCTTCCTCCCCTTCCATTGATATGCAGATGTGTGGTGTCTGCTCCAAACTTTTAACCGAAAAATCTGTTTGGAGAGGCCAAAAAGGCATCGTTGCCAATGGGTACCCTATTGTTGCTGTTCTATATTGTGGCCATGTTTACCATGCAGAATGTTTAGAGAGTATGACCCCTGAGATAAACACGCATGATCCAGCGTGCCCGGTTTGTACTTTTGGGGAGAAAAAGGTTCTCAAGTTGTCGGAAAAAGCACTTGCGACAGACATGGATTTGAAGGCTAAAATCAGCAAGAAGTTAAGGAATCGGTCAGTGGATGGTGGTGATTCTGTTGTGTTTAAGAATAGTGGGTCCAGGATGGGTTCAAGTTCCAGCATGAAGAGCTCTACAGGAAGTGGAAAGCCATTCTTAAAGAGACACTTCTCTTTCGGCAACAAATGGAGCAGATCCTTGTCAGACAACAGTAGTAGGAAAAAGAGATTTTTCTGGACAAAATCAAGCAAGGAGTGA | 1656 | 44.02 | MGSACCVAARDRTITDQSVSDVMPRNDRYSPSWSFRWDNRGRVAGEESSMNCFSDGAGMNNRLDNKSHTTVGTAHATEEGSPLDSSRSLTWQKSPPSEENGAPQSVWSEPFFNNSFRLNVRDHEIFSNGSESFELWLERLKYKVQPFMFGKFYLRYQIRDPPILNILPAIKQLQRISLGVIKTDERATKFNDPSSQFHGNLQLFTAKHLSWCMLLSAVICTAFASASSIYPLNSKNLPEGKETRRTQVALELSPTKILTPTHSVSSFSASPLSSSQGHLMPLTSLTPSRWPRRSPGHHLLRQVSDSRIRGIMSPNFSISEEGSPFMHPGWSNKSHRGSHGGSSDGWSIPAFPELATTSNRDRWSFDSDSLSFSRDRISRSSGRVSSSPSIDMQMCGVCSKLLTEKSVWRGQKGIVANGYPIVAVLYCGHVYHAECLESMTPEINTHDPACPVCTFGEKKVLKLSEKALATDMDLKAKISKKLRNRSVDGGDSVVFKNSGSRMGSSSSMKSSTGSGKPFLKRHFSFGNKWSRSLSDNSSRKKRFFWTKSSKE | 551 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g01608 | 551 | Gene3D | Zinc-RING finger domain, C3HC4 (zinc finger) | 376 | 455 | IPR013083 | - | |
| Ceso2g01608 | 551 | SUPERFAMILY | RING-U-box | 388 | 454 | - | - | |
| Ceso2g01608 | 551 | CDD | RING-H2 | 395 | 453 | - | - | |
| Ceso2g01608 | 551 | MobiDBLite | consensus disorder prediction | 61 | 106 | - | - | |
| Ceso2g01608 | 551 | MobiDBLite | consensus disorder prediction | 534 | 551 | - | - | |
| Ceso2g01608 | 551 | PANTHER | EXPRESSED PROTEIN | 1 | 459 | - | - | |
| Ceso2g01608 | 551 | MobiDBLite | consensus disorder prediction | 493 | 551 | - | - | |
| Ceso2g01608 | 551 | SMART | ring-2 | 395 | 453 | IPR001841 | - | |
| Ceso2g01608 | 551 | ProSiteProfiles | Zinc finger RING-type profile. | 395 | 454 | IPR001841 | - | |
| Ceso2g01608 | 551 | MobiDBLite | consensus disorder prediction | 322 | 343 | - | - | |
| Ceso2g01608 | 551 | MobiDBLite | consensus disorder prediction | 493 | 514 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g01608 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 40266 | Ceso2g01608 | Ceso4g01825 | |
| 40267 | Ceso2g01608 | Ceso8g01108 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ceso | Ceso-Chr2:34109534 | Ceso4g01825 | Ceso-Chr4:32894611 | wgd | |
| Ceso | Ceso-Chr2:34109534 | Ceso8g01108 | Ceso-Chr8:15547292 | wgd |