Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g01612 | ATGGCAGATCAAGTGTTGGAGGGTAGCCAACCAGTTGATCTCTCCAAGCACCCATCTGGAATTGTTCCTACTCTTCAGAACATTGTGTCTACTGTCAATCTCGACTGCAAGCTAGACCTCAAGGCAATTGCACTGCAAGCTCGTAATGCAGAATATAATCCGAAGCGTTTTGCTGCTGTAATCATGAGGATAAGAGAACCAAAAACGACGGCTTTAATCTTTGCTTCTGGGAAAATGGTATGTACAGGAGCCAAGAGCGAACAGCAATCCAAACTTGCGGCACGGAAGTATGCTCGGATTATTCAGAAACTTGGGTTTCCAGCCAAATTTAAGGATTTCAAAATTCAGAACATTGTGGGCTCATGTGACGTAAAATTTCCCATTAGACTCGAAGGCCTTGCATACTCTCATGGTGCCTTTTCAAGTTATGAACCAGAACTGTTCCCTGGATTGATATATCGGATGAAACAACCAAAAATCGTTCTGCTTATTTTTGTTTCTGGGAAAATTGTTCTTACAGGCGCCAAGGTCAGAGACGAGACTTATACTGCATTTGAGAACATATATCCCGTCCTTACTGAATTCAGAAAGAATCAGCAGTGGTACAACGCCCCTCTCTCCTAA | 624 | 42.95 | MADQVLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQWYNAPLS | 207 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g01612 | 207 | Gene3D | - | 26 | 194 | IPR012295 | - | |
| Ceso2g01612 | 207 | SUPERFAMILY | TATA-box binding protein-like | 21 | 114 | - | - | |
| Ceso2g01612 | 207 | CDD | TBP-eukaryotes | 22 | 195 | IPR033710 | GO:0003677(InterPro)|GO:0006352(InterPro) | |
| Ceso2g01612 | 207 | ProSitePatterns | Transcription factor TFIID repeat signature. | 143 | 192 | IPR030491 | - | |
| Ceso2g01612 | 207 | Hamap | TATA-box-binding protein [tbp]. | 19 | 198 | IPR000814 | GO:0003677(InterPro)|GO:0006352(InterPro) | |
| Ceso2g01612 | 207 | FunFam | TATA-box-binding protein 2 | 114 | 195 | - | - | |
| Ceso2g01612 | 207 | Pfam | Transcription factor TFIID (or TATA-binding protein, TBP) | 112 | 195 | IPR000814 | GO:0003677(InterPro)|GO:0006352(InterPro) | |
| Ceso2g01612 | 207 | Pfam | Transcription factor TFIID (or TATA-binding protein, TBP) | 23 | 104 | IPR000814 | GO:0003677(InterPro)|GO:0006352(InterPro) | |
| Ceso2g01612 | 207 | FunFam | TATA-box-binding protein 2 | 30 | 113 | - | - | |
| Ceso2g01612 | 207 | PRINTS | Transcription initiation factor TFIID signature | 25 | 40 | IPR000814 | GO:0003677(InterPro)|GO:0006352(InterPro) | |
| Ceso2g01612 | 207 | PRINTS | Transcription initiation factor TFIID signature | 115 | 131 | IPR000814 | GO:0003677(InterPro)|GO:0006352(InterPro) | |
| Ceso2g01612 | 207 | PRINTS | Transcription initiation factor TFIID signature | 139 | 154 | IPR000814 | GO:0003677(InterPro)|GO:0006352(InterPro) | |
| Ceso2g01612 | 207 | PRINTS | Transcription initiation factor TFIID signature | 68 | 86 | IPR000814 | GO:0003677(InterPro)|GO:0006352(InterPro) | |
| Ceso2g01612 | 207 | PRINTS | Transcription initiation factor TFIID signature | 49 | 68 | IPR000814 | GO:0003677(InterPro)|GO:0006352(InterPro) | |
| Ceso2g01612 | 207 | PRINTS | Transcription initiation factor TFIID signature | 158 | 174 | IPR000814 | GO:0003677(InterPro)|GO:0006352(InterPro) | |
| Ceso2g01612 | 207 | PANTHER | TATA-BOX BINDING PROTEIN | 9 | 200 | IPR000814 | GO:0003677(InterPro)|GO:0006352(PANTHER)|GO:0006352(InterPro)|GO:0016251(PANTHER)|GO:0140223(PANTHER) | |
| Ceso2g01612 | 207 | SUPERFAMILY | TATA-box binding protein-like | 112 | 203 | - | - | |
| Ceso2g01612 | 207 | Gene3D | - | 30 | 115 | IPR012295 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g01612 | K03120 | transcription initiation factor TFIID TATA-box-binding protein |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 40269 | Ceso2g01612 | Ceso4g01827 | |
| 40270 | Ceso2g01612 | Ceso8g01109 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ceso | Ceso-Chr2:34149239 | Ceso4g01896 | Ceso-Chr4:34447338 | dispersed | |
| Ceso | Ceso-Chr2:34149239 | Ceso4g01827 | Ceso-Chr4:32918038 | wgd | |
| Ceso | Ceso-Chr2:34149239 | Ceso8g01109 | Ceso-Chr8:15557481 | wgd |