Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g01649 | ATGATACGAGCGGTGATAGTGATGAACGACCAAGGCAAGCCTCGCCTCGTCAAATTCTACGAACATCAGCCTGTGGAGAAACAACAAGAACTCATTCGTAGCATATATGGAGTTCTATGCAGTAGAGCTGAGAATGTGAGCAACTTTGTTCAAGTAGATTCGACTTTCGGACCGGATACCAGACTTGTATACAAGACTTTTGCTACACTGTACTTCATTGTCATATTTGATGATTCTGAAAATGAGCTTGCCATTCTAGATCTCATGCAAGTATTTGTGGAGACATTGGACAAATGTTTCAGCAATGTTTGTGAGCTTGATATAGTGTTCAATTTCAACAAGGTACATACCATCCTGGATGAGATTATCTTGGGAGGTCAGGCTGGAGAAGAACCCAAATTCAATCCTTGGAGTTCCAAAATCCATATCCGGTTGGCAGGGACGATAGATAAATAG | 456 | 41.45 | MIRAVIVMNDQGKPRLVKFYEHQPVEKQQELIRSIYGVLCSRAENVSNFVQVDSTFGPDTRLVYKTFATLYFIVIFDDSENELAILDLMQVFVETLDKCFSNVCELDIVFNFNKVHTILDEIILGGQAGEEPKFNPWSSKIHIRLAGTIDK | 151 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g01649 | 151 | SUPERFAMILY | SNARE-like | 1 | 127 | IPR011012 | - | |
| Ceso2g01649 | 151 | ProSitePatterns | Clathrin adaptor complexes small chain signature. | 62 | 72 | IPR000804 | GO:0006886(InterPro)|GO:0016192(InterPro)|GO:0030117(InterPro) | |
| Ceso2g01649 | 151 | PANTHER | ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY | 2 | 133 | IPR016635 | GO:0015031(InterPro)|GO:0016192(PANTHER)|GO:0043231(PANTHER) | |
| Ceso2g01649 | 151 | PIRSF | AP-complex-sigma | 1 | 139 | IPR016635 | GO:0015031(InterPro) | |
| Ceso2g01649 | 151 | Gene3D | - | 1 | 135 | - | - | |
| Ceso2g01649 | 151 | Pfam | Clathrin adaptor complex small chain | 1 | 130 | IPR022775 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g01649 | K12399 | AP-3 complex subunit sigma |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ceso | Ceso-Chr1:8007394 | Ceso2g01649 | Ceso-Chr2:35189745 | dispersed | |
| Ceso | Ceso-Chr2:35189745 | Ceso5g01716 | Ceso-Chr5:43192504 | dispersed |