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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g01656 ATGCAGGTTGGTCTGCGGCTGCTTCTATGTCCACTTGGTTCCAACATTGTCGTAAGAACAGCATGCTGTTCTGTGGGCATTGTTTTACCTGTTTACTCTACGTTTAAGGCGATTGAGACGAAAAATCGGGATGAGGAACAAAAGTGGCTTTTATACTGGGCAGCATATGGGAGTTTTAGCGTTGCTGAAGTATTTGCAGACAAAATTATATACTGGTTTCCACTTTATCATCACATGAAGTTTGCTTTTCTTGTTTGGCTTCAGCTTCCTACCACCAATGGTGCTAAACAGTTATACATGAATCATTTACGTCCTTTCCTTCTGAGACATCAAGCTAACCTTGATCAACTTGTGGGGATCTTGTACAGCGAAACGGGTAAATTCGTTAGTGCTCACCAAGGAGAATTCAAGTTCATGAAGGCAATAGTAATGAAGATCTTGGTAACAGCAAAGCATTTGCTGGACAGTAGCAGTCAATCTGTTCCACCACCAGAGGGAAGAGCAATCACAGGCCAAAGACAACAAGTCGAGAGCTCCGATTTCGAAAGCGATGATGATGATGAAGATTTTGTAGCTTTTCCTGATAGCTTTTAG 594 42.09 MQVGLRLLLCPLGSNIVVRTACCSVGIVLPVYSTFKAIETKNRDEEQKWLLYWAAYGSFSVAEVFADKIIYWFPLYHHMKFAFLVWLQLPTTNGAKQLYMNHLRPFLLRHQANLDQLVGILYSETGKFVSAHQGEFKFMKAIVMKILVTAKHLLDSSSQSVPPPEGRAITGQRQQVESSDFESDDDDEDFVAFPDSF 197
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g01656 197 PANTHER HVA22-LIKE PROTEINS 26 124 IPR004345 -
Ceso2g01656 197 MobiDBLite consensus disorder prediction 156 177 - -
Ceso2g01656 197 MobiDBLite consensus disorder prediction 156 188 - -
Ceso2g01656 197 Pfam TB2-DP1, HVA22 family 30 106 IPR004345 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g01656 K17279 receptor expression-enhancing protein 5/6
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:35753692 Ceso6g03090 Ceso-Chr6:79341875 dispersed
Ceso Ceso-Chr2:35753692 Ceso3g00160 Ceso-Chr3:1832716 transposed