AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g01658 ATGGAGCTCCGATCAATTCAATCGCCAGTTGTTAGTAGTCTAGCTACACAAGGAGGCCTTATTGAAAAGCAGCAACTCATATGCTATCGCCAGCTTATCAGATCCTTTGGCACCAACAGAATTCTTCAATCAAGCTCTATCAAGCTTAGACCTATTCGATTTAAGGCTCAAGCCTCAAGTGCAACAAAAACAGGTTCGCTGCCTGCTGACACAATTTCAAAAGATGGTGAGAAAGACGGAAATCTCATCTTTGTTGCAGGAGCGACCGGCAAAGTTGGTTCGCGAACAGTAAGGGAGCTTTTGAAATTAGGATTTAACGTTCGAGCTGGTGTGCGAAGTACTCAAAGAGCAGAAGCTTTGGTGAAAAGCGTGCAGCAGATGAAACTTGATGAAGCATCATCTGATGGAAGTCAGCCTATAGAGAAGCTTGAACTTGTGGAGTGTGACTTGGAGAAACCGGAGCAGATTAAGCCGGCATTGGGCAAGGCTTCAACAGTTATATGCTGCATTGGAGCCAGCGAGAAAGAGATATTTGATGTTACTGGACCATACCGAATTGATTTTCAAGCCACAAAAAACCTTATTGATGCAGCTACTGCTTCAAAGGCGAAACAATTTATTTTGGTTACTTCTTTGGGAACAAACAAGTTTGGCTTTCCTGCTGCTGTATTGAATTTGTTCTGGGGAGTTCTATGCTGGAAAAGGAAGGCTGAAGAAGCACTGATTGCTAGTGGGATTCCTTACACTATAGTGAGACCTGGAGGCATGGAGCGTCCTACGGATTCTTTCAAGGAAACTCATAATCTTGCCCTCTATACAGAAGATACTTTATTTGGCGGTTTAGTATCGAATCTTCAGGTGGCAGAACTCCTTGCCTTCATGGCCAAAAACCCTACTCTCTCTTATTGTAAAGTTGTGGAAGTAATTGCAGAAACAACAGCACCATTGACTCCCATGGGGGATCTCCTAGCAAAAATACCACCTCAACGTACTCCACCCAAGTGCTATCAGGCACCAGAAGCTATCAAAGAACCTGAGCCTGTTCCCAAGAGTACCAGTTCTGAGAGTCCGCCAAGCATTGTCGCTGAAACACAATCTCAGTCAAAGACAGTATCGGCGAGGCCACTCTCCCCATATACTGCATACGAAGGTTTGAAACCTCCTGTATCCCCGATCCCAACTGCACCTGGTGGCAGTAAGGTAGTAGTAGAAGCAGTATCTACTTCTGTTGATTCTGAAACCACCACAACGTCAGAAATCACCACAACTTCAGAAACCGTAGCTGTTGCAGATGAACCTGCACCAGTGGCTGTGGGATTGCAAACGACCAGGCCTCTCTCTCCTTATGCTGCTTATGAGAACCTGAAGCCACCTACCTCTCCAACCCCAACACCAAGTGGATCCAAAGCAACACCACCATCTAGTTCCTCTGCTACACCAGAAATTGCATCAGAACCCACTACAAGCATTGATACAGTTGTGGAGGTTGAAGATGGTGGTGATGCCAAAGAGGATCCTCCTCAAACTTTGACTTCTAGCAATTCACCATACTATGCATATGACAATCTGAAACCTCCTACATCGCCATCTCCAAATCCACCATCGGTATCACCACCACCACCACCACCAACGGTGGTCCCAGTAGACAACGGGACTCCTATTGCTTCCACACCGGAGAACACTCCTGTTGCTTCCACACCGGAGAACACTCCTGTTGCTTTCACACCAGAGAACACCTCAGATAGCACGGTAGTGAAGCCAAGGCCACTTTCACCTTATCCCATGTATGAAAACTTGAAGCCTCCAAGTTCTCCTATCCCTTCCACCCCTCAATAA 1836 46.19 MELRSIQSPVVSSLATQGGLIEKQQLICYRQLIRSFGTNRILQSSSIKLRPIRFKAQASSATKTGSLPADTISKDGEKDGNLIFVAGATGKVGSRTVRELLKLGFNVRAGVRSTQRAEALVKSVQQMKLDEASSDGSQPIEKLELVECDLEKPEQIKPALGKASTVICCIGASEKEIFDVTGPYRIDFQATKNLIDAATASKAKQFILVTSLGTNKFGFPAAVLNLFWGVLCWKRKAEEALIASGIPYTIVRPGGMERPTDSFKETHNLALYTEDTLFGGLVSNLQVAELLAFMAKNPTLSYCKVVEVIAETTAPLTPMGDLLAKIPPQRTPPKCYQAPEAIKEPEPVPKSTSSESPPSIVAETQSQSKTVSARPLSPYTAYEGLKPPVSPIPTAPGGSKVVVEAVSTSVDSETTTTSEITTTSETVAVADEPAPVAVGLQTTRPLSPYAAYENLKPPTSPTPTPSGSKATPPSSSSATPEIASEPTTSIDTVVEVEDGGDAKEDPPQTLTSSNSPYYAYDNLKPPTSPSPNPPSVSPPPPPPTVVPVDNGTPIASTPENTPVASTPENTPVAFTPENTSDSTVVKPRPLSPYPMYENLKPPSSPIPSTPQ 611
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g01658 611 CDD SDR-a5 83 312 - -
Ceso2g01658 611 MobiDBLite consensus disorder prediction 550 586 - -
Ceso2g01658 611 PRINTS Proline rich extensin signature 325 341 - -
Ceso2g01658 611 PRINTS Proline rich extensin signature 346 358 - -
Ceso2g01658 611 PRINTS Proline rich extensin signature 522 547 - -
Ceso2g01658 611 PRINTS Proline rich extensin signature 457 474 - -
Ceso2g01658 611 FunFam Protein TIC 62, chloroplastic 79 329 - -
Ceso2g01658 611 Gene3D - 81 327 - -
Ceso2g01658 611 MobiDBLite consensus disorder prediction 349 374 - -
Ceso2g01658 611 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 1 610 IPR044719 -
Ceso2g01658 611 MobiDBLite consensus disorder prediction 469 491 - -
Ceso2g01658 611 Pfam NAD(P)H-binding 87 298 IPR016040 -
Ceso2g01658 611 MobiDBLite consensus disorder prediction 506 521 - -
Ceso2g01658 611 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 80 328 IPR036291 -
Ceso2g01658 611 MobiDBLite consensus disorder prediction 340 374 - -
Ceso2g01658 611 MobiDBLite consensus disorder prediction 526 548 - -
Ceso2g01658 611 MobiDBLite consensus disorder prediction 594 611 - -
Ceso2g01658 611 MobiDBLite consensus disorder prediction 448 611 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g01658 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:35817115 Ceso6g00105 Ceso-Chr6:1109199 dispersed