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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g01690 ATGGCGGACTCCACCAAACAACCTCCACACCTTCTCTTCAAACAACGCTCCTGGTCTCCTGACATCCACCGCGATAAGGAATGGCAGAACCTCAAGCTCAAGCAGCTCCGCCGTCACCACCACCGCCGCAGCAAGTCCACCGACGCCGCCGCCGCCGCCGCCGGAGGAGTTGTTGACGTCACCGATGACGATCTCAAGGAGCTCAAAGCGTGCTTCGATCTAGGTTTCGGTTTCGATCCGTCTTCTAACGATCTCGATCCGAAACTCACACAGGCTTTTCCTGCTCTGGAGCTTTACGCGGCCGTTAATCGACAGTATAATAATCGAATCCTCTCGAGGTCGTCTTCATCGATAAGCTCCGATTCTTCTTCTTCTTCTTCTTCGAGTTCTTCAAGCTCATTAAGCCCTAGCACCTCCATTATTGATCCAAGTGATGATCCGGAGAAGGTGAAGACGAAATTGAGACATTGGGCGCAAGTTGTTTCGTGTTCGATTCTGGATTCTTCTAAATGTTGCAGAATAGAAAGAAAGACCTAA 537 50.65 MADSTKQPPHLLFKQRSWSPDIHRDKEWQNLKLKQLRRHHHRRSKSTDAAAAAAGGVVDVTDDDLKELKACFDLGFGFDPSSNDLDPKLTQAFPALELYAAVNRQYNNRILSRSSSSISSDSSSSSSSSSSSSLSPSTSIIDPSDDPEKVKTKLRHWAQVVSCSILDSSKCCRIERKT 178
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g01690 178 MobiDBLite consensus disorder prediction 113 148 - -
Ceso2g01690 178 Pfam Protein of unknown function (DUF1685) 60 120 IPR012881 -
Ceso2g01690 178 MobiDBLite consensus disorder prediction 113 142 - -
Ceso2g01690 178 PANTHER OSJNBA0071G03.3 PROTEIN 10 166 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g01690 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:36682709 Ceso3g00906 Ceso-Chr3:12780767 dispersed
Ceso Ceso-Chr1:3479665 Ceso2g01690 Ceso-Chr2:36682709 transposed
Ceso Ceso-Chr3:84714926 Ceso2g01690 Ceso-Chr2:36682709 transposed
Ceso Ceso-Chr2:36682709 Ceso4g01950 Ceso-Chr4:35838713 wgd