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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g01696 ATGAGTAACAGCATCCATGGGAGTCTCCTTGAAGTCACCGTTGTAAGCTGCACTAATCTAAAAGATACGGAGTGGATCTCACGCCAAGATCCTTACGTGTGTGTTGAATATGGTAGCCACAAATCTTCCACACGTACCTGTAAAGGGTCAGGTTCAAATGGAAACTCAAATTTGATTGTGAACGTGAGGACAACCGAGAGCCTGTCACGTGTCGTATTCGATGGAGGGAAGAACCCCGCATTCCAAGAGAAATTCGTGTATAGCCTAGTTGAAGGACTAAGAGATTTGAACATTGCGGTTTGGAATAGCAATACCATCACACACGACGACTTGATCGGTACCGGAAGGGTTCCATTGACAAAGGCTCTTTCTCAAGGATTTGATGATAGCAGCTGGCCATTGCAAAGCAAAACTGGCAGGCATGCCGGAGAAGTTCGATTGATAATGCATTATTCCAATGCCAATAAACCGGGAAAAGATATTTATGCTCAAAAACCAGGAAAAGGCTTTGCTCCATCAGCTCCTCCGTATGTAACAAACAATGCACCCCCCGCGTATATGTATGGCACACCACCACCTATAACATCTTATCCGCCATCTCCCTACCCATCATACCCCCAAAATTCAGGTGTTTATCCAGCGGCTCCGTACCCACCTCAGGCTGGAGCTCCATACCCACCTCAGGCTGGAGCTCCATATCCTCCTCAACCATATCCGCCAAATCCCGCTCCTTATGGATCCCATTACCCCCCGGGTTCTCCATACCCTGGAATGTATCCTCCACCACCTTATTGA 795 47.55 MSNSIHGSLLEVTVVSCTNLKDTEWISRQDPYVCVEYGSHKSSTRTCKGSGSNGNSNLIVNVRTTESLSRVVFDGGKNPAFQEKFVYSLVEGLRDLNIAVWNSNTITHDDLIGTGRVPLTKALSQGFDDSSWPLQSKTGRHAGEVRLIMHYSNANKPGKDIYAQKPGKGFAPSAPPYVTNNAPPAYMYGTPPPITSYPPSPYPSYPQNSGVYPAAPYPPQAGAPYPPQAGAPYPPQPYPPNPAPYGSHYPPGSPYPGMYPPPPY 264
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g01696 264 PANTHER CONSERVED SERINE PROLINE-RICH PROTEIN (AFU-ORTHOLOGUE AFUA-2G01790) 1 53 IPR052981 -
Ceso2g01696 264 MobiDBLite consensus disorder prediction 217 246 - -
Ceso2g01696 264 ProSiteProfiles C2 domain profile. 1 133 IPR000008 -
Ceso2g01696 264 CDD C2 10 132 - -
Ceso2g01696 264 Gene3D C2 domain 8 153 IPR035892 -
Ceso2g01696 264 MobiDBLite consensus disorder prediction 212 246 - -
Ceso2g01696 264 Pfam C2 domain 56 125 IPR000008 -
Ceso2g01696 264 Pfam C2 domain 9 49 IPR000008 -
Ceso2g01696 264 SMART C2-3c 9 131 IPR000008 -
Ceso2g01696 264 SUPERFAMILY C2 domain (Calcium-lipid-binding domain, CaLB) 6 153 IPR035892 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g01696 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
40279 Ceso2g01696 Ceso4g01962
40280 Ceso2g01696 Ceso8g01197
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:37024252 Ceso4g01962 Ceso-Chr4:36165261 wgd
Ceso Ceso-Chr2:37024252 Ceso8g01197 Ceso-Chr8:17716015 wgd