Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g03175 | ATGAACATTTTACGAAAAGACCCTGGCCTACCCATTGATTCCTTCTACGAGCTTCGAGCTGGATGCACCGATGTTCCTGAAACCAAGTTTAAGATCAAGGCCGGAAAGACACTTAGCGTAAAAAGGTGGCGGGCTTCATTTTCACCAGAAGGGTCTCTTGATATAGGCAAGTGCCTTAGTCGAATCTATCGAGGAGGGGTTCATCCATCCATTAGAGGACAAGTGTGGGAATTTCTGCTTGGCTGCTATGATCCTAAAAGCACATATGATGAAAGAGAACAGATACGGAAAAGGCGAAGGGAGCAATATGCCGAGTTGAAAGATGCATGCAGTCATATGTTTCCTGTTGTCGGAAGTGGCAACTTCATCACTGCACGTGTGATCACAGCAAACGGCGATCCTATTCAAGATCCTGATCCTGGAAAGGTTTCAATACCACAATCTCAAGAAAATGCTGGTTCCACTACGGGTCCTCGCGAACAAGATAAGGACATAATCCAATGGAAGCTTGCTTTACACCAAATAGGCCTTGATGTGGTTCGAACAGATAGGACACTGATGTTTTACGAGAAGCAAGAGAATCTGGCAAAACTTTGGGATGTTCTTGCTGTGTATGCTTGGTTTGATAAAGATGTTGGTTATGGCCAAGGGATGAGTGATCTATGCTCCCCCATGATTATGCTTCTTGAAGATGAAGCAGATGCATTTTGGTGCTTTGAACGTCTAATGCGCAGATTGCGAGGTAATTTCAGATGCACGGGGAACACTGTTGGGGTTGAGGCACAACTCAGTATCTTGGCTAATGTCACCCAAGTTGTCGATCCTAAACTTCATCAGCACTTGGAACACCTAGGTGGAGGTGGTTACCTATTTGCGTTCCGGATGCTTATGGTGTTGTTTAGGCGAGAGTTTTCTTTCGGAGATTCATTGTACTTGTGGGAGATGATGTGGGCTTTGGAGTATGATCCAGGGCTGTTCTCTGTGTACGAGGGAGGTGAAAGGCAGCAGAAAGTGAAACGGAGATGGAAATCAAAACGACAATATGGCAAGTATGAGAGGAGAAACAAGGGATCGGAGGAGCTCCCTATATCTGTTTTCCTTGTAGCCAGTGTCCTCGAGGACAGGAGTGACAAGTTAATGACAGAAGCAAGGGGCTAG | 1158 | 45.68 | MNILRKDPGLPIDSFYELRAGCTDVPETKFKIKAGKTLSVKRWRASFSPEGSLDIGKCLSRIYRGGVHPSIRGQVWEFLLGCYDPKSTYDEREQIRKRRREQYAELKDACSHMFPVVGSGNFITARVITANGDPIQDPDPGKVSIPQSQENAGSTTGPREQDKDIIQWKLALHQIGLDVVRTDRTLMFYEKQENLAKLWDVLAVYAWFDKDVGYGQGMSDLCSPMIMLLEDEADAFWCFERLMRRLRGNFRCTGNTVGVEAQLSILANVTQVVDPKLHQHLEHLGGGGYLFAFRMLMVLFRREFSFGDSLYLWEMMWALEYDPGLFSVYEGGERQQKVKRRWKSKRQYGKYERRNKGSEELPISVFLVASVLEDRSDKLMTEARG | 385 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g03175 | 385 | Gene3D | putative rabgap domain of human tbc1 domain family member 14 like domains | 149 | 250 | - | - | |
| Ceso2g03175 | 385 | FunFam | TBC1 domain family member 15-like | 152 | 250 | - | - | |
| Ceso2g03175 | 385 | SUPERFAMILY | Ypt-Rab-GAP domain of gyp1p | 54 | 280 | IPR035969 | - | |
| Ceso2g03175 | 385 | MobiDBLite | consensus disorder prediction | 133 | 160 | - | - | |
| Ceso2g03175 | 385 | Gene3D | - | 256 | 384 | - | - | |
| Ceso2g03175 | 385 | SUPERFAMILY | Ypt-Rab-GAP domain of gyp1p | 258 | 381 | IPR035969 | - | |
| Ceso2g03175 | 385 | SMART | tbc-4 | 63 | 345 | IPR000195 | - | |
| Ceso2g03175 | 385 | PANTHER | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN | 58 | 381 | - | GO:0005096(PANTHER)|GO:0090630(PANTHER) | |
| Ceso2g03175 | 385 | ProSiteProfiles | TBC-rab GAP domain profile. | 66 | 320 | IPR000195 | - | |
| Ceso2g03175 | 385 | Pfam | Rab-GTPase-TBC domain | 155 | 326 | IPR000195 | - | |
| Ceso2g03175 | 385 | MobiDBLite | consensus disorder prediction | 142 | 160 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g03175 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 973259 | Ceso | Ceso2g03175 | Ceso-Chr2:80408540 | Ceso6g00466 | Ceso-Chr6:6484012 | |
| 999812 | Ceso | Ceso2g03175 | Ceso-Chr2:80408540 | Ceso4g01125 | Ceso-Chr4:17495058 |