Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g03177 | ATGAAATCCCCTGGATTTCAGATCCAGTTCACAGACATGGTTTCCACAGCCAAGATCAAATCTGTTGATTTTTACAGGAAAATTCCAAGAGATTTGACAGAGGCGTCACTATCAGGTGCCGGCTTGTCTGTCATAGCAGCTGTTGCCATGATGTTTCTATTTGGAATGGAGCTACATAACTATTTGGCCATTAGTACCTCGACTTCTGTCATAGTTGATAGAAGTTCTGACGGGGATTACTTACGGATTGATTTTAATATTAGTTTACCGGCCTTATCCTGTGAGTTTGCATCTGTGGATGTGAGTGATGTACTGGGAACTAACAGGTTGAACATAACAAAAACAGTTCGCAAATATTCAATTGATAAACATCTACGAACTACTGGCTCTGAGTATGATTCTGGACCAGTTACTAATTTACTCAAGCACGATGATGAAGTTGATGAGGAATATGGTGAAGGATCTGTTACTCTAAATGCACGTAATTTTGATAGAATATCTCATCAGCATTCAATTTTGGTTGTGAATTTCTATGCTCCTTGGTGCTATTGGAGTAACCGTCTGAAACCCTCATGGGAGAAGGCAGCCAAAATTATGAGAGAAAGACATGATCCAGAAGTGGATGGTCGTATCATTATGGGCAAGGTGGACTGTACTGAAGAAGCTGATCTGTGTAGGAGGCACCACATACAAGGTTATCCGTCGATCCGGATATTCCGTAAGGGCAGTGATGTCAGGCAAGTCCCTGTGGACGAGCATGGGCACCACGAGCATGAATCATATTATGGTGACAGAGATACAGAGACCTTGGTGAATACAATGGAAAACTTGGTTGCACCTATTTCGTTGGAGTCACCAATCCTGGCCTTGGAGGACAAATCTGCAAAAAGACCTGCACCACGTGAAGCAGGATGTAGAATTGAAGGGTTTGTACGAGTCAAGAAGGTTCCTGGTAATCTTGTAATCTCAGCTCGTTCGGGGGCCCACTCCTTTGACGCTTCCCAGATGAACATGTCACATGTAATTTCTAGTTTTTCCTTCGGTAAGAGGATCAGTGGAAGGGTGATGAGTGATATGAAGCGAATATTACCTTACATTGGTGTAAGCCATGACAAGTTGAATGGCCAGTCATATCTCACTGACCCAGAAGATCGTGCCAACGTTACAATAGAGCATTATCTACAAGTCGTGAAGACGGAGGTTATGAGGTCATCTCATCAACTTATTGAGGATTACGAGTACACAGCACATAGTAGCTTGATGCATGCTCTTTCCATCCCTGTTGTAAAGTTCCATATTGAGCCATCTCCGATGCAGGTCTTGATAACGGAAAATTCCAAATCGTTTTCTCATTTCATCACCAACGTCTGTGCCATTATTGGTGGTGTTTTTACGGTTGCTGGGATACTGGATTCAATTCTGCACAACACTTTGAGATTGGTGAAAAAAGTTGAACTGGGGAAGAATTTTTAG | 1473 | 42.5 | MKSPGFQIQFTDMVSTAKIKSVDFYRKIPRDLTEASLSGAGLSVIAAVAMMFLFGMELHNYLAISTSTSVIVDRSSDGDYLRIDFNISLPALSCEFASVDVSDVLGTNRLNITKTVRKYSIDKHLRTTGSEYDSGPVTNLLKHDDEVDEEYGEGSVTLNARNFDRISHQHSILVVNFYAPWCYWSNRLKPSWEKAAKIMRERHDPEVDGRIIMGKVDCTEEADLCRRHHIQGYPSIRIFRKGSDVRQVPVDEHGHHEHESYYGDRDTETLVNTMENLVAPISLESPILALEDKSAKRPAPREAGCRIEGFVRVKKVPGNLVISARSGAHSFDASQMNMSHVISSFSFGKRISGRVMSDMKRILPYIGVSHDKLNGQSYLTDPEDRANVTIEHYLQVVKTEVMRSSHQLIEDYEYTAHSSLMHALSIPVVKFHIEPSPMQVLITENSKSFSHFITNVCAIIGGVFTVAGILDSILHNTLRLVKKVELGKNF | 490 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g03177 | 490 | SUPERFAMILY | Thioredoxin-like | 151 | 277 | IPR036249 | - | |
| Ceso2g03177 | 490 | PANTHER | ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN | 13 | 484 | IPR045888 | GO:0005783(PANTHER)|GO:0030134(PANTHER) | |
| Ceso2g03177 | 490 | Pfam | Thioredoxin | 156 | 248 | IPR013766 | - | |
| Ceso2g03177 | 490 | ProSiteProfiles | Thioredoxin domain profile. | 129 | 279 | IPR013766 | - | |
| Ceso2g03177 | 490 | CDD | PDI-a-family | 156 | 274 | - | - | |
| Ceso2g03177 | 490 | Pfam | Endoplasmic reticulum vesicle transporter | 298 | 471 | IPR012936 | - | |
| Ceso2g03177 | 490 | FunFam | Protein disulfide-isomerase 5-4 | 143 | 302 | - | - | |
| Ceso2g03177 | 490 | Gene3D | Glutaredoxin | 146 | 298 | - | - | |
| Ceso2g03177 | 490 | Pfam | Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) | 19 | 109 | IPR039542 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g03177 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 40050 | Ceso1g04006 | Ceso2g03177 | |
| 40412 | Ceso2g03177 | Ceso4g01435 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 970283 | Ceso | Ceso1g04006 | Ceso-Chr1:101723318 | Ceso2g03177 | Ceso-Chr2:80414292 | |
| 970284 | Ceso | Ceso1g04007 | Ceso-Chr1:101731534 | Ceso2g03177 | Ceso-Chr2:80414292 | |
| 973261 | Ceso | Ceso2g03177 | Ceso-Chr2:80414292 | Ceso6g02978 | Ceso-Chr6:77428512 | |
| 999813 | Ceso | Ceso2g03177 | Ceso-Chr2:80414292 | Ceso4g01435 | Ceso-Chr4:24566196 |