AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g03180 ATGGATGCTCAAGTCGAAACCATTGAGGCACGCTTGCAATCTTTCCTTGGTCAACTCCAATCAGAAGTAGGTGTGCTTGATAGAATTGTCCACAAAAATAAGAACCAGCATCGCAGAAGCTCGTATTTCAACTACTTGTTGAAGGTGAGGAGAGACTGCAAGCTTCTTCAATCAACTAACTTGGAGGAAACCGTTAAGTCCTCTTTTCTTGTCATCAATGGGGATCGACCTAATCAAAAGGTGCAACTATTGGAAAGTTTGAAGAGAAGAAAATGTGATGGTGGCAAACACAATTTTCTGGTGCGACTTCAGGGTGGCGCACATCTACTTTCGCAGCTTGACACTTGGCGTATTGGTACCAAGTTGTTGGGACTATTGCGAGTGTACTGGTTTCACGTCCCTGAGGTTGGGCTTTGGGAGTTTGCTGGTGAAATATGTGGGGGGAGAGTTAAGGAACTTACCAGTTTAGATTGTCTAGTATACGAGTTGTTCATCTCCTTGACCTTGCACAGAGAGATATCTACTTTGCTTGCTAGATCCTTTTTTATGGGATTTTCTATGACTGTGTTGGCTCTGCTTGCACGTCTTCGAGTTTTGACTCAACAAGTCATCAGAGAATATTACCCAACAAATGAGCAAGCTGTCTTTTTGGAGTGTGTATGGGAAACTGATAACTTCATTTTATTGGAGAAGAAGAGTGAACCAGAGACAATAAAGGATGATGTCATTTGTCAAGTGGACAACACTCCTGAAGAAGACAGTGCTACCATGAGGATGGAAAATCTTTCTTCCATGGAGGGTCTTACTAGCGATTGTAAACAAGTTGACGATCAAAATGATGATTCTGGTGTTTTAGAGCCATCTAGCAAGAATCAAGAACACAAAGAGACTACAAGTTTCAAGTTGTTTGTCTATATTAGAATCCTACCTTGTGATTTCAGAAGTTTGATGGAAGTGAGCATTGATGAAGATAGCAGCAGCAGCAGCAGGGTTCAGACTCTGGAAGCCATCAAGGGCGGTGGAGGATCCATTAAAGTTGGAACCACAGGCACCATCAATGCCTTAATGACAAGAGAACTACAATCCATCAAAGTTGCATCTCCAAAGACACCCAGATCTCCAAAACCAGCCTTAGATGGTGCTAAAGATACAAAACCCAAAGCAGATGAAGCAAGCACTAGCAGTAGTAGCAGTACCAGCAACACCATGAATGAAAAACACAAAACCAGACACCACCATACTAGAAAAGGCAGCAGAAATCCTATTCTGAATCATTCGGATAGCGTAACCTCTGTTGATGGGACAAGAAAAAACAACAAGAAGGGTTCGTGCATGGTCGAAATCGTGGACATAAAATGCGGAGTACCTGACAAGAACTGGACCAATCCCATAACAAACAAGTTCAAGAAACTCACTTTCTCAAAGCTTTCCGAAACCAATGGTGTAAAGTAA 1452 42.22 MDAQVETIEARLQSFLGQLQSEVGVLDRIVHKNKNQHRRSSYFNYLLKVRRDCKLLQSTNLEETVKSSFLVINGDRPNQKVQLLESLKRRKCDGGKHNFLVRLQGGAHLLSQLDTWRIGTKLLGLLRVYWFHVPEVGLWEFAGEICGGRVKELTSLDCLVYELFISLTLHREISTLLARSFFMGFSMTVLALLARLRVLTQQVIREYYPTNEQAVFLECVWETDNFILLEKKSEPETIKDDVICQVDNTPEEDSATMRMENLSSMEGLTSDCKQVDDQNDDSGVLEPSSKNQEHKETTSFKLFVYIRILPCDFRSLMEVSIDEDSSSSSRVQTLEAIKGGGGSIKVGTTGTINALMTRELQSIKVASPKTPRSPKPALDGAKDTKPKADEASTSSSSSTSNTMNEKHKTRHHHTRKGSRNPILNHSDSVTSVDGTRKNNKKGSCMVEIVDIKCGVPDKNWTNPITNKFKKLTFSKLSETNGVK 483
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g03180 483 MobiDBLite consensus disorder prediction 271 292 - -
Ceso2g03180 483 PANTHER OS09G0504900 PROTEIN 172 203 - -
Ceso2g03180 483 MobiDBLite consensus disorder prediction 363 440 - -
Ceso2g03180 483 Pfam Nucleolus and neural progenitor protein, N-terminal 4 113 IPR027951 -
Ceso2g03180 483 MobiDBLite consensus disorder prediction 421 438 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g03180 K27075 nucleolus and neural progenitor protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
973263 Ceso Ceso2g03180 Ceso-Chr2:80445663 Ceso3g02460 Ceso-Chr3:51785957