AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g03184 ATGATAACATGGATTCAAAAGCTTCTCATCACATTCGGTCCTCCTTTCATTTGGCTCGTCTGCTTGATTTACTTCACCCAGGGTTTTAGATCTTTTGTATGGACAGCAGTTTCATACCAGCTTAAAGACAGATTAAAGTTATCGCCTTCTGCTTCTCAATTCGTAACATCCATTTCGTTTTTTCCATGGAGCATCAAACCGATTTACGGAATTGTTTCAGATTGCATCCCAGTAAAGGGAAGGAAAAGGATTCCTTATTTAGTCATTGCGACTCTGCTTTCGCTCTTTCCATGGGTGATTCTTGGCCTGCAGGAATCCGTAAGAAATTCCCGAGATCAACTCATGATCTTATTGCTACTGCAAAATCTAGGCTCTGCAATGGCAGATGTTGTGATTGATGCAATGATTGCAGAGGCGGCAAGGCATGAAAAGGCTAAATTCGCTGGCGACCTGCAATCGGTATCATGGATGACAATGGCTGTTGGTGGAATTTGTGGGAGTTTGTTTGGAGGATATGCACTAACTAACTTCCAAATGGGCAACATATTCTTGCTTTTCTCTGTTTTGCCAACTATTCAGCTGTTTTCATGTGGTTTTGTGACGGAAAATCCTATAACCACTTCACCGTTGCCTGAGTTTTCTACTTGTAATGACACCAACGTACAAAACGAAAATGTATCAGATGAAGATAAGTTATCAACCGACATGCCTAAACCAGGTACTTTGATGAGAAAAAGGAGCAATAAAGGTGGCAAGAAATTATTAACATCCGATACAAGTAAAATGCATGGAAAAGACGAATCTTTGCCATCACAATGGTTCCAATCTTTTAAAGTGGCTGGTTATACTTTGTTCAAAGCTTTTGGACGCCCAGTTATCTTGAGACCAATGGGTTGGTTTTTCCTATCACAGGTGACCATTCCAAACCTTTCAACGGTCATGTTCTACTACGAGACTGAAGTTCTAAATCTAGATGCTTCCTTTCTGGGTACATCGCGAGTTATTGGTTGGATCGGCCTCATGCTTGGAACTTTCACGTACAACCGCTATTTAAAGAGTATGAAGTTAAGAAAGATTCTTATGTTCGCTCATGTTACTCTTTCCATGTTGACACTTCTAGACATAGTATTGGTTTCTAGATTACATGTTCGGTTTGGCATATCCGATGAAATATTGGTATTATTCGGGTCTGCTCTCTCAGATGCAGTCCATCAATTCAAGTTCATGCCTTTCTTGATCTTATCAGGACAATTGTGCCCACCCGGAATAGAAGGGACTCTGTTTGCGCTATTCATGTCGATAAACAACTTTGGGTCGACAATGAGTTCATTCTTTGGTGCTGGTTTGGCTTCGGTTCTAAACATCTCTTCGGGTTCTTTTGATAATCTTGTTTTTGGGATTGGGATTGAAGTCGTCTGCACATTGATACCCGTTGCTTTCTTGTTTTTGATACCAAAGGAAGCTACGGGGATAGTAACATAA 1482 40.69 MITWIQKLLITFGPPFIWLVCLIYFTQGFRSFVWTAVSYQLKDRLKLSPSASQFVTSISFFPWSIKPIYGIVSDCIPVKGRKRIPYLVIATLLSLFPWVILGLQESVRNSRDQLMILLLLQNLGSAMADVVIDAMIAEAARHEKAKFAGDLQSVSWMTMAVGGICGSLFGGYALTNFQMGNIFLLFSVLPTIQLFSCGFVTENPITTSPLPEFSTCNDTNVQNENVSDEDKLSTDMPKPGTLMRKRSNKGGKKLLTSDTSKMHGKDESLPSQWFQSFKVAGYTLFKAFGRPVILRPMGWFFLSQVTIPNLSTVMFYYETEVLNLDASFLGTSRVIGWIGLMLGTFTYNRYLKSMKLRKILMFAHVTLSMLTLLDIVLVSRLHVRFGISDEILVLFGSALSDAVHQFKFMPFLILSGQLCPPGIEGTLFALFMSINNFGSTMSSFFGAGLASVLNISSGSFDNLVFGIGIEVVCTLIPVAFLFLIPKEATGIVT 493
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g03184 493 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 6 488 IPR039309 -
Ceso2g03184 493 Gene3D MFS general substrate transporter like domains 15 483 IPR036259 -
Ceso2g03184 493 NCBIfam folate-biopterin family MFS transporter 4 486 IPR004324 GO:0016020(InterPro)
Ceso2g03184 493 SUPERFAMILY MFS general substrate transporter 17 486 IPR036259 -
Ceso2g03184 493 CDD MFS-FBT 18 482 - -
Ceso2g03184 493 Pfam BT1 family 27 486 IPR039309 -
Ceso2g03184 493 MobiDBLite consensus disorder prediction 224 267 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g03184 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
971495 Ceso Ceso2g01045 Ceso-Chr2:19454851 Ceso2g03184 Ceso-Chr2:80473034
973265 Ceso Ceso2g03184 Ceso-Chr2:80473034 Ceso5g03472 Ceso-Chr5:76608027