Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g03185 | ATGATGCAGCAGCAGCAGCAGAAACAGAGTTGTTTGCCTCCCCTGTCTTTAAACTACTACCCGTGGTTGGTTGCTTATGACCAAGATAGCGGAGACCAGATTTTCTACAATATCCATGACCCGTTGTCTTGCTATCGGTGTCGAATCCCTGAGTTGGTCGGGAAAAGTATCAGTGCGTTTTTCCATGGATGGGTTGTTCTCTCCAACCATCAACAAACAATCTGGTTTCTTTGGAACCCAATAGCAGCCAGGTTGATTCGCCTCCCGCGTTTACTTCTCAAAGATGATGTAGATCCTGATTATCCCCTTCAGTGTTGTTATTTGTCGTCCCCTCCCGATGTTCCTGGTTCCATTCTCCTGTTGGCAAGAAGTGATAAGCCTAACTTTGTTTTCTGTAGGTTAGACCGTAAAAGAAAACGATTAAGATGGACAGAGATGTCATATGCTAAACAGCTCACTAGCATAATTGGTCCTCGTGTTGATGATCACGACACTGGGATCCTATCTTGTTTAACCTGTTGGAATGGTGAAGTGTATGCCGCCCGTGGTGGTTGGGTCGTAAAAGTTCACATTGTGGTTAAGGAGAAGTCAGTCCTGATAAGTCTCTTGCCATTTGTGAAATTCCCCCGACTTTTTAATGATACCCCGTCTGGTCGAGCTGTCTGCTCGTGTATATTCTTTCCAAAATCTTCTTTAGAACTGTTGGTAGTTTTTGTAGATCTTGTTGAGCTAGAGAAGAAAAAACCTGTTGGTGTATCTTTGTGTAAACTGGATATAACTAGCATGGTGTGGGTGGAAAAGGAAGACTTGGAAGACACTGTGTTATACGTTGGTGATTACTGCAGCCATGCCTTTGTCTCGGAATTTGGGGGTTATGTACACATTCTTCACGAAAGGGGCAAAGTAGTATATTCATACAATGTTAAAGATAAAACCATCTCGATGTCCTTTATGCATTGTCTACTAGACTTGACACCAAGCCATGTCATGGTATGGGCAATGCCCAAGCCTGAATTTAGGTTACAAAGTGATGGAAAATGCGAAGTTGTTTCTAAATCATATGGAAAGTGCAAAGCTAAGAAAGATGAGTTGGTGGTAAAGGAAGTAGTGCAAAAGGAGATTGAAGCAAATCATGTGCTGAATCTTCCGTTTCATGTTTTGGAGATGATAATGGAGTTTTGTGCCGGTGTCGAATACCTAAACTTTCGTGCTACATGCAAACTTTGTCATCTAGCAGGGCCCCTGATTAACAGAAAAGTGCCGCAGAGGGGGCTGCAGGCATATTCATTAGTTTCACCATGGTTGATGGTGTTTGACAAACGTGAAGGCATCATCACTTTCACAGATCCGATGTTCGGTGACAAGTACTTTATAAGACCATCATCTCCGGAAATCGTTTCCGATAGCAGACTAGCGTGTTCCAGGTACGGTTGGTTGTTGTTGCTTATCGGGGACTCACGTATGGCCTTCTTTAACCCTTTCACAAGTGAAATCCGTGAGCTTCCTGCAGGAAGGATTGTTTGCAATACTTTTTGTTTCTCAACACCACCAACTTCCCCTGATTGTATGGTGGTGGGGTTTTCAAGCTTGCGTGTTTTCTTCAACTTTGTAGCTGGGGAACCGACTTGGCATCAATTGGATCTGGATATTGGTGGTGCCACTCCATTTTTTTACAAGTTTCCAACTATTTGTGGTCGAGATGTTTATGCCTTGGATAATCATGGGAAAGTTGATGTTTTCAGAGAAGATTACACGTGGGAGGCCGTTGTAGACCAGCCCTCAACAAGTAGTTGCTCTGAGGCAGAGTATTTCCTAACAACATGCAATCAACATCTTTTATTATTGATGGTTGGAGATTTTGGAGAAGGAGTTGAGGTATTCAAGTTGACTGAAGAATTAGAATGGGAGAAAATGGATCGTTTAGGAAGGTATGCAATTTATATTTGTGATGCATCATCAGCATCGACATGTGTCTGCATGGCCGCTAAAACACCAGAAATGGAGAACAAAATCTTTTTTTCAAGATTCCATTCCAAGAACGGGAAGGTTATGTTTTACTCTTTGGAAACAGGCAGGTTTCACACGCTTGATGGCAGGAATATTGGCCAGGAAGCTAGTCTCGAGGATTTTTATCAGCATATGTACGATCATACCTGGATTGAACCAACTTGGGCTTTGAAGGTTGAGAAAGATTTGAAGTTCCATCAATTGCAGGCTTACATGCAAGATCAATATCGATTACTTGGAGAAAATGTAGCTAGGTTAAGAACCGATCTTATGAAGGAGCAGCTTTCTACCTTTCGTTCTCAATTAGAAGATTTTGCTCGCAAACATAAGAACGATATTCGCAAGAACCCTGCTTTCAGATCACAGTTTCACGAGATGTGTGCAAAAGTAGGAGTAGACCCACTCGCATCAAATAAAGGTTTCTGGGCTGAGCTCTTAGGGATCGGTGATTTCTATTATGAACTTGGGGTGCAAATCGTTGATGTCTGCTTGGCTACTAGACCCCATAATGGGGGTTTGATCAACTTGGAGGAGCTATGCAAGCTTCTAAGTCAAAGACGAAAGGGTGCTCGTGAGGTTGTGTCCGAAGATGATTGCTTGCGTGCAATTGGTAAACTCAAGGTGTTAGGGAGTGGTTTTGAAGTGATTACTGTTGGAAAAAGAAAGCTTGTTCGCTCCGTCCCAACTGAATTGAAGAAAGATCATAATGAAATTCTAGAGTTGTCTCAAGCTCAAGGTTTTGTGACAGTTGAGGAAGTAGAGAGACGGCTGTCATGGTCCAGTGGTCGTGCCACCGATGCCCTTGAAACTTTATTAGACGAGGGGCTTGCGATGATTGATGAAGGCCACAGAGATGGCAAACGACGCTATTGGTTCCCTTGTGTCTCTTCCGTCTCTTCCTTTGTGGCATCTGAGACTCTTTGA | 2931 | 43.06 | MMQQQQQKQSCLPPLSLNYYPWLVAYDQDSGDQIFYNIHDPLSCYRCRIPELVGKSISAFFHGWVVLSNHQQTIWFLWNPIAARLIRLPRLLLKDDVDPDYPLQCCYLSSPPDVPGSILLLARSDKPNFVFCRLDRKRKRLRWTEMSYAKQLTSIIGPRVDDHDTGILSCLTCWNGEVYAARGGWVVKVHIVVKEKSVLISLLPFVKFPRLFNDTPSGRAVCSCIFFPKSSLELLVVFVDLVELEKKKPVGVSLCKLDITSMVWVEKEDLEDTVLYVGDYCSHAFVSEFGGYVHILHERGKVVYSYNVKDKTISMSFMHCLLDLTPSHVMVWAMPKPEFRLQSDGKCEVVSKSYGKCKAKKDELVVKEVVQKEIEANHVLNLPFHVLEMIMEFCAGVEYLNFRATCKLCHLAGPLINRKVPQRGLQAYSLVSPWLMVFDKREGIITFTDPMFGDKYFIRPSSPEIVSDSRLACSRYGWLLLLIGDSRMAFFNPFTSEIRELPAGRIVCNTFCFSTPPTSPDCMVVGFSSLRVFFNFVAGEPTWHQLDLDIGGATPFFYKFPTICGRDVYALDNHGKVDVFREDYTWEAVVDQPSTSSCSEAEYFLTTCNQHLLLLMVGDFGEGVEVFKLTEELEWEKMDRLGRYAIYICDASSASTCVCMAAKTPEMENKIFFSRFHSKNGKVMFYSLETGRFHTLDGRNIGQEASLEDFYQHMYDHTWIEPTWALKVEKDLKFHQLQAYMQDQYRLLGENVARLRTDLMKEQLSTFRSQLEDFARKHKNDIRKNPAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDVCLATRPHNGGLINLEELCKLLSQRRKGAREVVSEDDCLRAIGKLKVLGSGFEVITVGKRKLVRSVPTELKKDHNEILELSQAQGFVTVEEVERRLSWSSGRATDALETLLDEGLAMIDEGHRDGKRRYWFPCVSSVSSFVASETL | 976 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g03185 | 976 | Gene3D | - | 816 | 896 | IPR036388 | - | |
| Ceso2g03185 | 976 | FunFam | Vacuolar-sorting protein SNF8 | 816 | 896 | - | - | |
| Ceso2g03185 | 976 | Pfam | Domain of unknown function (DUF295) | 21 | 287 | IPR005174 | - | |
| Ceso2g03185 | 976 | Pfam | Domain of unknown function (DUF295) | 433 | 686 | IPR005174 | - | |
| Ceso2g03185 | 976 | Gene3D | - | 897 | 975 | IPR036388 | - | |
| Ceso2g03185 | 976 | FunFam | Vacuolar protein sorting-associated protein | 897 | 975 | - | - | |
| Ceso2g03185 | 976 | Gene3D | - | 749 | 810 | - | - | |
| Ceso2g03185 | 976 | PANTHER | EAP30 SUBUNIT OF ELL COMPLEX | 731 | 969 | IPR016689 | GO:0000814(PANTHER)|GO:0000814(InterPro)|GO:0043328(PANTHER)|GO:0071985(InterPro) | |
| Ceso2g03185 | 976 | Pfam | EAP30-Vps36 family | 736 | 950 | IPR040608 | - | |
| Ceso2g03185 | 976 | SUPERFAMILY | Winged helix DNA-binding domain | 900 | 964 | IPR036390 | - | |
| Ceso2g03185 | 976 | SUPERFAMILY | Winged helix DNA-binding domain | 749 | 899 | IPR036390 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g03185 | K12188 | ESCRT-II complex subunit VPS22 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 40413 | Ceso2g03185 | Ceso4g01387 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 973266 | Ceso | Ceso2g03185 | Ceso-Chr2:80484654 | CesoJARYMX010000072g00002 | CesoJARYMX-ChrJARYMX010000072:27936 | |
| 999816 | Ceso | Ceso2g03185 | Ceso-Chr2:80484654 | Ceso2g04244 | Ceso-Chr2:102228388 |