AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g03197 ATGTTTCAGGAAAAGGAGTGTAATTCACCTGTCAAAGATGACATTAGTAGGGATATAGTACCATCAGTAAATGTATTAAAGCAATTGGCCATAGGTGTTCAGACCACAAAAATTGTGAAGTCAATGAAGGATCTTATGATATTATCAAGAGAAGAATCACCTGTGAAGGAGAGATCTCCCTTGAGGTTATCTGCTATGAAGTCATTCGTAGTAGGGGAGAAGGAAGATACATTTTCTTATGAGTTCGGTCGTGATGCGAAAGTAATGTCTTTTATCCATTCACTAATAAATACAGAAGGACATTTTTCTCGAAGGAAAATCGGATCTCGGGTGGAGAAGAATACGAATACCAACCTTACTAATTTCGCCAAAGAAATCCACGGTGCTCCTCCCGAGTGCTTTGTTACCGATCTCGCTGAAGCCATGGGAAGTCTGAAAACTCTGCGGAAAATGGGGTTGTTTTGGGCCACAGTTGTTGCAGAAGTGAGAAGTCTATGGTGTGAAGGACAACATATTCCCGGCATCCCCCCTGATGAGAATCCCGACTTAAATTCGTGCTTGTTGTACCAACAGTTTCAGGTTATCAACTGCTGTATTTCTAGGAAAAGGCGTCGTGCTATTGCCACCGAATCGTTAGAATCCGTTTTGAAACTAGCGAATCTTGGTGGTGACCACAAGTGTCGAGATGTTCCTCCGCTGAGCCCTGTTGTGTATGCGAGAATTAGCTCTGGGGAACTTGTGCTTCGGTTAGGAGCGGATAAACGAAGAGAGAACTGTACGCTTTTAAAAACCGGTGAACCTGTATATACCCCGGTTATGCAGGAAGGGCCTCTACTCACAGAAGATTTTATCAAGGAAACAGAGGAATTAGTCTTACGTACGGGGAGCGTTGGTGTAGGTTGTTCTCAGCTTCTTTCGGACATGCAAGCTTTCAAGGCTGCAAATCCGGGGTGCATATTAGAAGATTTTGTTAGATGGCACTCACCCCCGGACTGGACCGAAGCATCAACAGCCGATGAAAGTAAAGAATCCACCACTGATGGTAACAATTTGTCTTCCAAAGGACAATTGAGTATCCGTATGCAGAAAGAAGGCATGCACTACGTAATTTGTGGCGAGAACTGTGGGAAACTGCAAAACCAGTACCTGCTGTTAGACAATCTCCACTATACGATGAGGATTTATCTGTGTAAGGAAGGTATCCTGCATAGCTTAGAGAACATATCGCCTTCTGGTTTATTTGAACAGCTGTTTCTTTCTCTTTTAAGTTCGGGATGTACAATTGCTGAGGGGAGAATCTACAATAATGAAAATATGTACAAGACGTTTAAGGAGTGTAAAGACTACATTATTCTTACATGTCAAGCCAAAAATTGGATCCAGAAAGCCGATGATATATGCCAGGTGTACGAGACAGTGAGGATGATGGCATTGCATCCAGATGGGGTTATAAGGGTCACAACGAAGCAGGGGCATGATGATAGTGAGAGTTTTGAACAAAAAGGTGGTGGCTTTGGGAAACTTGGCTCCATGTTTGGTGGTGGAATGGATTCAAAAACACCACCAAAGAACCAGGAACCCACAACCTTCACAAAGAAGGCACCAAAACCTAAAACTCCTTTTGAAAATATTGAACCAACACCACAGTGGCTGATGTAA 1659 43.04 MFQEKECNSPVKDDISRDIVPSVNVLKQLAIGVQTTKIVKSMKDLMILSREESPVKERSPLRLSAMKSFVVGEKEDTFSYEFGRDAKVMSFIHSLINTEGHFSRRKIGSRVEKNTNTNLTNFAKEIHGAPPECFVTDLAEAMGSLKTLRKMGLFWATVVAEVRSLWCEGQHIPGIPPDENPDLNSCLLYQQFQVINCCISRKRRRAIATESLESVLKLANLGGDHKCRDVPPLSPVVYARISSGELVLRLGADKRRENCTLLKTGEPVYTPVMQEGPLLTEDFIKETEELVLRTGSVGVGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTEASTADESKESTTDGNNLSSKGQLSIRMQKEGMHYVICGENCGKLQNQYLLLDNLHYTMRIYLCKEGILHSLENISPSGLFEQLFLSLLSSGCTIAEGRIYNNENMYKTFKECKDYIILTCQAKNWIQKADDICQVYETVRMMALHPDGVIRVTTKQGHDDSESFEQKGGGFGKLGSMFGGGMDSKTPPKNQEPTTFTKKAPKPKTPFENIEPTPQWLM 552
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g03197 552 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 19 489 IPR045700 GO:0005096(PANTHER)|GO:0005096(InterPro)|GO:0043547(PANTHER)|GO:0043547(InterPro)
Ceso2g03197 552 Pfam Rab3 GTPase-activating protein catalytic subunit 249 365 IPR026147 -
Ceso2g03197 552 MobiDBLite consensus disorder prediction 342 356 - -
Ceso2g03197 552 MobiDBLite consensus disorder prediction 510 552 - -
Ceso2g03197 552 MobiDBLite consensus disorder prediction 333 356 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g03197 K18270 Rab3 GTPase-activating protein catalytic subunit