AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g03199 ATGGAGATTGAAATCGTTGGGAGGCATGCTCTCCTCTTCGACGATGATTCCACAGCAGCATTCGTTAACTCTCAAGATGCACTTGTCGAATGGAATTCTCTACTAATCGATCGTTACGACGTCCGCCACCTCCTCTCCGCCCCTCCGCCGTCACGGCGGCGGCGCAACCCGCAAACGTCGCACTCATCGAACGCCGACGCAGAAATCGACCACGAACGGTACCTGGATCTCCCGTCACCTTCCGATGAACAAGAAGCGGATGCGAAACCGGAATCTGTGGGTGGATTTAACGCAGTTCCTTTTTCTTATGGAAACTATGAGGCTTCTAATGATCAAAAGACCGCCGAGACTGAATCGGAATGCCCTGGATTTCATCCCCCCTTCCCTGTTCCTGACAGCCTGGTTCACAACGTGCCTCCTACAGAGAAGGTTCATCAGATTATTGCGAGGACTGCTCTTTTTGTCAGCAAAAATGGAGGCCAATCAGAGATTGTTTTGAGGGTGAAACAAGGAGACAACCCGACTTTTGGGTTCTTAATGCCTGATCATCACCTACATCCGTACTTCAGGTTTCTAATCGATCACCAGGATCTTTTGCAGTCAAAAGACAATGGACAGGCTGAAAACGATGATAAAACATCCAATACTGAGAACACAACAGGAGCACTATCTTTGCTTGGTTCTGTATATGGCACTGGTGAGGATGAGGATGGTGGAGCCGATCATGCATCGTCTTCCAAAGAGTGCGTATCTGATGTGACCATCCCTCTTGCAGCAGGGAAAACCATGTTGCCAGCTGGAAAAGATGAGCCTATTTCAAAGCATTCACTTTCTTCTAAGGAAGATGCTCCTATTTTAAAAAGGAATTCTTTAACAAGTGCATTGAAATCTGGACGAACTAGCAGCACGAGAAAAGTTGAGTCCATAGGTTCACTCTCTGCTGTTCCAGATAAGTTGCGGGCTTCTTCTCTTCCTCCCATTCCCAAGAACGAGAACATGCTCCTGGATCCTCCGTCTGACATGAAACGGCTAGTTGACAAGATAGTAGAGTTCATCATCAAGAATGGGAGGCAGTTTGAGGCAGTACTTATGGAACAAGACCGAGCCCATGGGAGATTCCCATTCCTAATCCCATCTAACAAATTCCATCCATACTATTTAAAAGTTCTCCAGAAAACCCAAGAGGTACAGTTAACCAAACACTTCTCCCCACCAGATACAAATTTACTTGCTCAAAATAGTGTTGGATGCTCAAACTTTGAACTTGCCATTTATCATCATCTTGACCATATTACTTTGAAATTAACTGTCAAGAGTTTGCACAATGAAAAGGAAGATTTCAGAGGACATATCTTGAACAAGAAAACGTCCATCTCAAGGGAGTCTGAAAGTTTGATGGAATCTGATGATATACCACTTGATTCTGAAAGGAAAGAGAAGTTTAAGATGGTAATCAACAAGTCTAAAAAGGAAGGATCAGATTTGCCATCGAAAGCCACACAGCCACTTGGGGTCCAGGTGGATGCTGCTCAAGCAGCAGCTATTCTTCAGGCTGCCACCAGAGGCATTAAGCATCCAAATTTGGGGATCCTTTCATCGCTGAATGGCAACAGTTATGGCCCCAGAAGTGAGAGTGGGCAGCCCTCTAATTCTGCTAAAGACGTCGCAAGTGAAGCCGATTCCTCTGACGCACACTTGACTCAGGAGCAGAAATTGAAGGCCGAGAGACTTAAACGGGCTAAGATGTTTGTGGCAATGCTGAAAAGCGGAGCTGCTCCAACGAAAACCGAACCATCCCGTGGCTTATCAGCCGAGCCACAAGGGTCAGGGGCTTCTTTAGGCGATGACAATCACGTTGCAGCCAAAGAAAGAGAGAGAAGCATGGTCCCAATGGATTTCGATACTTCAGACAAAAAGATAAAATCGGAAAAGGAACATTTGGACGAAGAAAGACGAGCAAAGAGGAAATACAGAGCTAGATCTAGCAAAGATGAAGAAGGTGAAGCAGCTGAATCACAAGAAGAGGAAGAAGAAGAAGATGGTGATGAGAGGGAAGGAAAAAGGTCGAGTAAACACCGTTCGAAAAAGCACCGATCTCGTAATCGTTCGGTTGAAGAAGAGAGTGAAGAAGGATACGAAAACGAGAGAGATTATAAGCATTCAAAGAGAAGGCATCGGTCTCATCGTACTTCCCATAAAGACGACGAAGAAAGGGATCATAAGCGCTCGAGGAAGAAGAAGCATCGATCTTCTAGCTCATATGAAGACAATGATGAACAAGAAAGCGAACCCGAAAGGGTACATGAAAACACTAGAACGAAGCATCGGTCACACCATTCGTCACACGACGAAGACTCTCATGATGAAGGGGAAAGCAACATTAAACATTCTCGGAAAACGCACTCTTCTCGTGGAGAAGATGAAGGGAGGGAGGACAGACATCGTAGGAGGAAACATCGGTCTCATAAATCTTCTCGTCACAGTAGAGATAAGCATAAGCATAGGAAAAGTCACTCGTCTAGACATAAACTGACGCCTGAGGTCTCTTTAGACGAGCTGAGTGAGCATAATAAGGCCGATAAGCATGGAAAGAGATCAAACTCGGAAAGAGAAGAACTGGAAGAGGGGGAGATAAGCTCAAAGTTATCGGGTCAGTCGAGAGGCGGGCCTTTGGCTGATGTTGCTAGTAGAGAACCTTCGGTGGATGTATCGAGTGCTTATCAAGATCGGAGACCAGTGATTCATCCCTCCGAGACAACCGATGTTCCTGATGACCTCAGGGCCAAAATCAGAGCAATGTTACTGTCCACAATGTAA 2817 45.79 MEIEIVGRHALLFDDDSTAAFVNSQDALVEWNSLLIDRYDVRHLLSAPPPSRRRRNPQTSHSSNADAEIDHERYLDLPSPSDEQEADAKPESVGGFNAVPFSYGNYEASNDQKTAETESECPGFHPPFPVPDSLVHNVPPTEKVHQIIARTALFVSKNGGQSEIVLRVKQGDNPTFGFLMPDHHLHPYFRFLIDHQDLLQSKDNGQAENDDKTSNTENTTGALSLLGSVYGTGEDEDGGADHASSSKECVSDVTIPLAAGKTMLPAGKDEPISKHSLSSKEDAPILKRNSLTSALKSGRTSSTRKVESIGSLSAVPDKLRASSLPPIPKNENMLLDPPSDMKRLVDKIVEFIIKNGRQFEAVLMEQDRAHGRFPFLIPSNKFHPYYLKVLQKTQEVQLTKHFSPPDTNLLAQNSVGCSNFELAIYHHLDHITLKLTVKSLHNEKEDFRGHILNKKTSISRESESLMESDDIPLDSERKEKFKMVINKSKKEGSDLPSKATQPLGVQVDAAQAAAILQAATRGIKHPNLGILSSLNGNSYGPRSESGQPSNSAKDVASEADSSDAHLTQEQKLKAERLKRAKMFVAMLKSGAAPTKTEPSRGLSAEPQGSGASLGDDNHVAAKERERSMVPMDFDTSDKKIKSEKEHLDEERRAKRKYRARSSKDEEGEAAESQEEEEEEDGDEREGKRSSKHRSKKHRSRNRSVEEESEEGYENERDYKHSKRRHRSHRTSHKDDEERDHKRSRKKKHRSSSSYEDNDEQESEPERVHENTRTKHRSHHSSHDEDSHDEGESNIKHSRKTHSSRGEDEGREDRHRRRKHRSHKSSRHSRDKHKHRKSHSSRHKLTPEVSLDELSEHNKADKHGKRSNSEREELEEGEISSKLSGQSRGGPLADVASREPSVDVSSAYQDRRPVIHPSETTDVPDDLRAKIRAMLLSTM 938
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g03199 938 MobiDBLite consensus disorder prediction 815 841 - -
Ceso2g03199 938 MobiDBLite consensus disorder prediction 617 667 - -
Ceso2g03199 938 MobiDBLite consensus disorder prediction 228 249 - -
Ceso2g03199 938 MobiDBLite consensus disorder prediction 589 922 - -
Ceso2g03199 938 SUPERFAMILY Surp module (SWAP domain) 124 194 IPR035967 GO:0003723(InterPro)|GO:0006396(InterPro)
Ceso2g03199 938 PANTHER SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT 2 923 IPR040397 GO:0000395(PANTHER)
Ceso2g03199 938 MobiDBLite consensus disorder prediction 534 567 - -
Ceso2g03199 938 SUPERFAMILY Surp module (SWAP domain) 323 391 IPR035967 GO:0003723(InterPro)|GO:0006396(InterPro)
Ceso2g03199 938 Coils Coil 640 660 - -
Ceso2g03199 938 MobiDBLite consensus disorder prediction 700 720 - -
Ceso2g03199 938 Gene3D Surp module 330 397 IPR035967 GO:0003723(InterPro)|GO:0006396(InterPro)
Ceso2g03199 938 MobiDBLite consensus disorder prediction 534 557 - -
Ceso2g03199 938 MobiDBLite consensus disorder prediction 749 814 - -
Ceso2g03199 938 SMART DRY-EERY-2 1 107 IPR019147 -
Ceso2g03199 938 Pfam Alternative splicing regulator 3 87 IPR019147 -
Ceso2g03199 938 ProSiteProfiles SURP motif repeat profile. 344 386 IPR000061 GO:0003723(InterPro)|GO:0006396(InterPro)
Ceso2g03199 938 SMART surpneu2 145 198 IPR000061 GO:0003723(InterPro)|GO:0006396(InterPro)
Ceso2g03199 938 SMART surpneu2 342 395 IPR000061 GO:0003723(InterPro)|GO:0006396(InterPro)
Ceso2g03199 938 MobiDBLite consensus disorder prediction 842 878 - -
Ceso2g03199 938 MobiDBLite consensus disorder prediction 261 289 - -
Ceso2g03199 938 Gene3D Surp module 140 195 IPR035967 GO:0003723(InterPro)|GO:0006396(InterPro)
Ceso2g03199 938 ProSiteProfiles SURP motif repeat profile. 147 189 IPR000061 GO:0003723(InterPro)|GO:0006396(InterPro)
Ceso2g03199 938 MobiDBLite consensus disorder prediction 668 682 - -
Ceso2g03199 938 Pfam Surp module 342 391 IPR000061 GO:0003723(InterPro)|GO:0006396(InterPro)
Ceso2g03199 938 Pfam Surp module 146 194 IPR000061 GO:0003723(InterPro)|GO:0006396(InterPro)
Ceso2g03199 938 MobiDBLite consensus disorder prediction 46 71 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g03199 - -