AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g03206 ATGAATATGAGTAATCCAACTACTCCGATGAACGCAAACGCTCCGTCGTCGAGCTCCGGTGGCGCCGGATCCCCCGATTCAGCTCCAAGGAGAAACTCTAAAAGACCTAAATATTCTAGGTTTACTCAGCAGGAACTTCCAGCATGCAAGCCGATTCTTACACCGAAATGGGTGATTTCAGCATTCATGCTTGTGACCATTGTCTTCATACCAATTGGACTTGCTTCCCTATTTGCTTCTCGTGATGTTGTTGAAATTATTGACCGATACGATAATGCCTGCATACAAGGCACAAAAAATGAAAAAGTCCAATTTATACAATCCAATGCAAATAAAACATGCACCAGAAGTTTGACAGTTAAAAAGCGTATGAAGCAGCCAATTTATGTTTATTATCAGCTGGACAATTTCTACCAGAATCATCGCAGGTATGTCAAGAGTCGAAGTGATTCACAATTGAGAAACCGTGGTGATGAGAATCAAACAAGTGATTGTAAGCCTGAACATGATGCCAATGGGATGGCGATTGTGCCTTGTGGTCTTGTAGCCTGGAGTTTGTTCAATGACACCTATAGCTTCTCCACTGGTAGCAACCAGCAATTGGCTGTAAACAAGAGACACATTTCATGGAAGAGTGACAGGGAGGACAAGTTTGGCAGTGACGTCTTCCCAAAAAATTTCCAGAATGGATCTCTTATTGGTGGTGGACGTCTCAACGAGTCTATGCCACTAAGTCAGCAGGAAGACCTCATTGTGTGGATGCGAACTGCGGCCCTTCCCACTTTCAGGAAGTTGTATGGGAAGATAGAGGTGGATATCGAGGCAGGTGAGACGATAAATGTGATATTGGAGAACAACTACAACACTTACAGCTTTAGCGGCAAGAAGAAACTTGTGCTTTCAACTACCAGCTGGCTTGGAGGAAAGAATAACTTTATTGGCATTGCATATCTTGCTGTTGGCGGCTTGTGTCTTTTACTAGCTACGACTTTCACCCTCATATATCTTGTTAAGCCAAGGCATCTTGGAGATCCGACTTATTTGTCATGGAACCGAAACCCAGGTGGTCACTGA 1074 43.67 MNMSNPTTPMNANAPSSSSGGAGSPDSAPRRNSKRPKYSRFTQQELPACKPILTPKWVISAFMLVTIVFIPIGLASLFASRDVVEIIDRYDNACIQGTKNEKVQFIQSNANKTCTRSLTVKKRMKQPIYVYYQLDNFYQNHRRYVKSRSDSQLRNRGDENQTSDCKPEHDANGMAIVPCGLVAWSLFNDTYSFSTGSNQQLAVNKRHISWKSDREDKFGSDVFPKNFQNGSLIGGGRLNESMPLSQQEDLIVWMRTAALPTFRKLYGKIEVDIEAGETINVILENNYNTYSFSGKKKLVLSTTSWLGGKNNFIGIAYLAVGGLCLLLATTFTLIYLVKPRHLGDPTYLSWNRNPGGH 357
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g03206 357 MobiDBLite consensus disorder prediction 147 169 - -
Ceso2g03206 357 MobiDBLite consensus disorder prediction 1 26 - -
Ceso2g03206 357 Pfam LEM3 (ligand-effect modulator 3) family - CDC50 family 77 340 IPR005045 GO:0016020(InterPro)
Ceso2g03206 357 PANTHER CELL CYCLE CONTROL PROTEIN 50 29 349 IPR005045 GO:0005783(PANTHER)|GO:0005794(PANTHER)|GO:0005886(PANTHER)|GO:0016020(InterPro)
Ceso2g03206 357 PIRSF Lem3-Cdc50 7 353 IPR005045 GO:0016020(InterPro)
Ceso2g03206 357 MobiDBLite consensus disorder prediction 147 166 - -
Ceso2g03206 357 MobiDBLite consensus disorder prediction 1 40 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g03206 K26935 cell cycle control protein 50
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:80936826 Ceso4g01297 Ceso-Chr4:21153233 dispersed